Gene annotation
Transcriptome id Sobic.002G386500.1
Synonym Sb02g040270
Functional annotation expressed protein
UniProt C5X378
Pfam -
Panther DB PTHR34565
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46430 : -
RAP-DB (Rice) LOC_Os03g40920.1 : expressed protein
MaizeGDB (Corn) Zm00025a038253
Brachypodium KQK11785 , KQK07705
Barley HORVU2Hr1G076650.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G386500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
2 Sobic.006G083500 SLL1 protein, putative, expressed -
3 Sobic.004G060500 fiber protein Fb15, putative, expressed -
4 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
5 Sobic.010G012500 ATOZI1, putative, expressed -
6 Sobic.002G190900 expressed protein -
7 Sobic.002G398901 - -
8 Sobic.008G129400 cytochrome c oxidase polypeptide Vc, putative, expressed -
9 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
10 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
11 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
12 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
13 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
14 Sobic.004G306200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
15 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
16 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
17 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
18 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
19 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
20 Sobic.006G106100 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e


Gene co-expression network
sample Sobic002G386500 Sobic002G386500 Sobic009G176000 Sobic009G176000 Sobic002G386500--Sobic009G176000 Sobic006G083500 Sobic006G083500 Sobic002G386500--Sobic006G083500 Sobic004G060500 Sobic004G060500 Sobic002G386500--Sobic004G060500 Sobic004G211833 Sobic004G211833 Sobic002G386500--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic002G386500--Sobic010G012500 Sobic002G190900 Sobic002G190900 Sobic002G386500--Sobic002G190900 Sobic002G398901 Sobic002G398901 Sobic002G386500--Sobic002G398901 Sobic008G129400 Sobic008G129400 Sobic002G386500--Sobic008G129400 Sobic010G041600 Sobic010G041600 Sobic002G386500--Sobic010G041600 Sobic009G176000--Sobic002G398901 Sobic007G051000 Sobic007G051000 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic006G083500--Sobic004G211833 Sobic006G083500--Sobic010G012500 Sobic006G083500--Sobic003G215700 Sobic006G083500--Sobic002G418400 Sobic006G083500--Sobic009G176000 Sobic006G083500--Sobic002G398901 Sobic003G209000 Sobic003G209000 Sobic006G083500--Sobic003G209000 Sobic006G083500--Sobic007G051000 Sobic001G134400 Sobic001G134400 Sobic006G083500--Sobic001G134400 Sobic004G060500--Sobic003G215700 Sobic004G060500--Sobic009G176000 Sobic001G519000 Sobic001G519000 Sobic004G060500--Sobic001G519000 Sobic001G047800 Sobic001G047800 Sobic004G060500--Sobic001G047800 Sobic004G060500--Sobic006G083500 Sobic004G060500--Sobic002G418400 Sobic002G309700 Sobic002G309700 Sobic004G060500--Sobic002G309700 Sobic002G296200 Sobic002G296200 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300 Sobic004G211833--Sobic010G012500 Sobic004G211833--Sobic006G083500 Sobic004G211833--Sobic002G398901 Sobic004G220000 Sobic004G220000 Sobic004G211833--Sobic004G220000 Sobic004G211833--Sobic007G051000 Sobic004G211833--Sobic009G176000 Sobic004G211833--Sobic002G418400 Sobic004G211833--Sobic002G190900 Sobic004G211833--Sobic003G215700 Sobic010G012500--Sobic004G211833 Sobic010G012500--Sobic002G398901 Sobic010G012500--Sobic006G083500 Sobic010G012500--Sobic007G051000 Sobic010G012500--Sobic002G190900 Sobic010G012500--Sobic004G220000 Sobic010G012500--Sobic009G176000 Sobic002G375100 Sobic002G375100 Sobic010G012500--Sobic002G375100 Sobic010G012500--Sobic002G418400 Sobic002G190900--Sobic002G398901 Sobic002G190900--Sobic010G012500 Sobic002G190900--Sobic007G051000 Sobic002G190900--Sobic009G176000 Sobic002G081600 Sobic002G081600 Sobic002G190900--Sobic002G081600 Sobic005G188100 Sobic005G188100 Sobic002G190900--Sobic005G188100 Sobic001G281400 Sobic001G281400 Sobic002G190900--Sobic001G281400 Sobic002G190900--Sobic004G211833 Sobic001G374700 Sobic001G374700 Sobic002G190900--Sobic001G374700 Sobic002G398901--Sobic002G190900 Sobic002G398901--Sobic010G012500 Sobic002G398901--Sobic009G176000 Sobic002G398901--Sobic007G051000 Sobic002G398901--Sobic004G211833 Sobic002G398901--Sobic002G081600 Sobic002G398901--Sobic002G418400 Sobic002G398901--Sobic006G083500 Sobic009G215200 Sobic009G215200 Sobic002G398901--Sobic009G215200 Sobic010G018400 Sobic010G018400 Sobic008G129400--Sobic010G018400 Sobic008G129400--Sobic009G176000 Sobic008G129400--Sobic002G190900 Sobic008G129400--Sobic002G398901 Sobic008G129400--Sobic007G051000 Sobic008G129400--Sobic006G083500 Sobic008G129400--Sobic010G012500 Sobic001G445800 Sobic001G445800 Sobic008G129400--Sobic001G445800 Sobic008G129400--Sobic003G209000 Sobic001G034700 Sobic001G034700 Sobic010G041600--Sobic001G034700 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic001G086300 Sobic001G086300 Sobic010G041600--Sobic001G086300 Sobic010G178200 Sobic010G178200 Sobic010G041600--Sobic010G178200 Sobic010G041600--Sobic008G129400 Sobic010G041600--Sobic007G051000
Octagon: transcription factors


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