Gene annotation
Transcriptome id Sobic.010G175900.2
Synonym ATNRT1:2, NTL1, NRT1:2, Sb10g022800
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5Z559
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF98
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G69850 : nitrate transporter 1:2
RAP-DB (Rice) LOC_Os06g38294.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a042281 , Zm00025a042284 , Zm00025a051163
Brachypodium KQK17878 , KQK17879 , PNT75721 , PNT75720
Barley HORVU7Hr1G086170.11 , HORVU7Hr1G086170.10 , HORVU7Hr1G086170.3 , HORVU7Hr1G086170.2 , HORVU7Hr1G086170.1 , HORVU7Hr1G086170.7 , HORVU7Hr1G086170.6 , HORVU7Hr1G086170.5 , HORVU7Hr1G086170.4 , HORVU7Hr1G086170.9 , HORVU7Hr1G086170.8
Wheat TraesCS7A02G365100 , TraesCS7D02G357300 , TraesCS7D02G357300 , TraesCS7B02G262200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G234000 expressed protein -
2 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
3 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
4 Sobic.001G536500 expressed protein -
5 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
6 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
7 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
9 Sobic.007G149300 expressed protein -
10 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
11 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
12 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
13 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
14 Sobic.002G405600 early response to dehydration 15, putative, expressed -
15 Sobic.004G259600 slowmo homolog, putative, expressed -
16 Sobic.006G100700 expressed protein -
17 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
18 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
19 Sobic.007G123300 C1-like domain containing protein, expressed -
20 Sobic.001G398700 expressed protein -


Gene co-expression network
sample Sobic010G175900 Sobic010G175900 Sobic009G234000 Sobic009G234000 Sobic010G175900--Sobic009G234000 Sobic010G267600 Sobic010G267600 Sobic010G175900--Sobic010G267600 Sobic003G063200 Sobic003G063200 Sobic010G175900--Sobic003G063200 Sobic001G536500 Sobic001G536500 Sobic010G175900--Sobic001G536500 Sobic001G449700 Sobic001G449700 Sobic010G175900--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic010G175900--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic010G175900--Sobic003G110200 Sobic004G247200 Sobic004G247200 Sobic010G175900--Sobic004G247200 Sobic007G149300 Sobic007G149300 Sobic010G175900--Sobic007G149300 Sobic009G234000--Sobic010G175900 Sobic004G306300 Sobic004G306300 Sobic009G234000--Sobic004G306300 Sobic005G028700 Sobic005G028700 Sobic009G234000--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic009G234000--Sobic004G259600 Sobic006G100700 Sobic006G100700 Sobic009G234000--Sobic006G100700 Sobic002G202100 Sobic002G202100 Sobic009G234000--Sobic002G202100 Sobic009G234000--Sobic003G063200 Sobic009G234000--Sobic004G247200 Sobic005G168100 Sobic005G168100 Sobic009G234000--Sobic005G168100 Sobic010G267600--Sobic003G202200 Sobic003G092900 Sobic003G092900 Sobic010G267600--Sobic003G092900 Sobic010G267600--Sobic007G149300 Sobic002G405600 Sobic002G405600 Sobic010G267600--Sobic002G405600 Sobic001G383700 Sobic001G383700 Sobic010G267600--Sobic001G383700 Sobic009G247900 Sobic009G247900 Sobic010G267600--Sobic009G247900 Sobic010G267600--Sobic001G449700 Sobic010G204600 Sobic010G204600 Sobic010G267600--Sobic010G204600 Sobic001G259700 Sobic001G259700 Sobic010G267600--Sobic001G259700 Sobic003G063200--Sobic005G028700 Sobic003G063200--Sobic010G204600 Sobic003G063200--Sobic004G247200 Sobic001G055600 Sobic001G055600 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G063200--Sobic009G023200 Sobic001G390300 Sobic001G390300 Sobic003G063200--Sobic001G390300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic001G536500--Sobic010G204600 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G536500--Sobic001G390300 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic001G449700--Sobic003G110200 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic001G481100 Sobic001G481100 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic003G202200--Sobic001G383700 Sobic003G202200--Sobic001G449700 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic004G191400 Sobic004G191400 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic003G202200--Sobic009G036000 Sobic003G110200--Sobic001G449700 Sobic003G110200--Sobic003G202200 Sobic003G110200--Sobic007G149300 Sobic002G092801 Sobic002G092801 Sobic003G110200--Sobic002G092801 Sobic003G102200 Sobic003G102200 Sobic003G110200--Sobic003G102200 Sobic003G110200--Sobic001G383700 Sobic003G110200--Sobic001G481100 Sobic003G110200--Sobic003G021500 Sobic003G110200--Sobic005G186100 Sobic004G247200--Sobic003G063200 Sobic004G247200--Sobic005G028700 Sobic004G247200--Sobic004G259600 Sobic004G247200--Sobic001G055600 Sobic004G247200--Sobic010G204600 Sobic004G065500 Sobic004G065500 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic007G149300--Sobic001G383700 Sobic007G149300--Sobic001G449700 Sobic007G149300--Sobic003G202200 Sobic007G149300--Sobic010G267600 Sobic007G149300--Sobic009G247900 Sobic007G149300--Sobic004G191400 Sobic007G149300--Sobic003G110200 Sobic007G149300--Sobic001G481100 Sobic009G122400 Sobic009G122400 Sobic007G149300--Sobic009G122400
Octagon: transcription factors


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