Gene annotation
Transcriptome id Sobic.001G536500.1
Synonym Sb01g049930
Functional annotation expressed protein
UniProt C5WMN8
Pfam -
Panther DB PTHR35107
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65720 : -
RAP-DB (Rice) LOC_Os03g01960.1 : expressed protein
MaizeGDB (Corn) Zm00025a045752 , Zm00025a000168
Brachypodium KQK24055
Barley HORVU4Hr1G089740.2 , HORVU4Hr1G089740.3 , HORVU4Hr1G089740.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G536500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
2 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
3 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
4 Sobic.001G445800 expressed protein -
5 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
6 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
7 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
8 Sobic.001G037000 PHD finger protein, putative, expressed -
9 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
10 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
11 Sobic.004G145801 - K02978: RP-S27e, small subunit ribosomal protein S27e
12 Sobic.008G011600 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
13 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
14 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
15 Sobic.004G351500 - -
16 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
17 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
18 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
19 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
20 Sobic.006G106100 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e


Gene co-expression network
sample Sobic001G536500 Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic001G536500--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic010G204600--Sobic009G023200 Sobic009G129000 Sobic009G129000 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic009G033700 Sobic009G033700 Sobic010G204600--Sobic009G033700 Sobic005G028700 Sobic005G028700 Sobic003G063200--Sobic005G028700 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic003G063200--Sobic001G055600 Sobic003G063200--Sobic001G037000 Sobic003G063200--Sobic009G023200 Sobic003G063200--Sobic001G390300 Sobic004G306300 Sobic004G306300 Sobic003G063200--Sobic004G306300 Sobic002G407900 Sobic002G407900 Sobic003G063200--Sobic002G407900 Sobic002G070200 Sobic002G070200 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic004G186500--Sobic001G536500 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic004G186500--Sobic005G028700 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic002G078400 Sobic002G078400 Sobic001G445800--Sobic002G078400 Sobic003G249800 Sobic003G249800 Sobic001G445800--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic001G067601 Sobic001G067601 Sobic001G019900--Sobic001G067601 Sobic005G228000 Sobic005G228000 Sobic001G019900--Sobic005G228000 Sobic001G019900--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic001G019900--Sobic003G350300 Sobic001G019900--Sobic003G249800 Sobic001G019900--Sobic002G046100 Sobic001G019900--Sobic001G445800 Sobic002G212200 Sobic002G212200 Sobic001G019900--Sobic002G212200 Sobic001G019900--Sobic003G321700 Sobic009G131100--Sobic001G536500 Sobic009G131100--Sobic002G078400 Sobic004G060600 Sobic004G060600 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic006G281200 Sobic006G281200 Sobic009G131100--Sobic006G281200 Sobic003G125650 Sobic003G125650 Sobic001G390300--Sobic003G125650 Sobic001G046100 Sobic001G046100 Sobic001G390300--Sobic001G046100 Sobic001G390300--Sobic001G055600 Sobic001G402050 Sobic001G402050 Sobic001G390300--Sobic001G402050 Sobic001G374700 Sobic001G374700 Sobic001G390300--Sobic001G374700 Sobic001G493001 Sobic001G493001 Sobic001G390300--Sobic001G493001 Sobic005G196800 Sobic005G196800 Sobic001G390300--Sobic005G196800 Sobic002G375100 Sobic002G375100 Sobic001G390300--Sobic002G375100 Sobic001G367600 Sobic001G367600 Sobic001G390300--Sobic001G367600 Sobic001G037000--Sobic003G249800 Sobic001G037000--Sobic003G063200 Sobic001G422900 Sobic001G422900 Sobic001G037000--Sobic001G422900 Sobic001G037000--Sobic010G204600 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic003G181500 Sobic003G181500 Sobic001G037000--Sobic003G181500 Sobic006G081100 Sobic006G081100 Sobic010G054200--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic010G054200--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic010G054200--Sobic001G058900 Sobic009G223300 Sobic009G223300 Sobic010G054200--Sobic009G223300 Sobic003G129800 Sobic003G129800 Sobic010G054200--Sobic003G129800 Sobic001G225700 Sobic001G225700 Sobic010G054200--Sobic001G225700 Sobic009G233400 Sobic009G233400 Sobic010G054200--Sobic009G233400 Sobic003G150000 Sobic003G150000 Sobic010G054200--Sobic003G150000 Sobic002G372400 Sobic002G372400 Sobic010G054200--Sobic002G372400
Octagon: transcription factors


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