Gene annotation
Transcriptome id Sobic.008G011600.1
Synonym Sb08g001090
Functional annotation ubiquitin-like protein 5, putative, expressed
UniProt C5Y4J3
Pfam PF00240
Panther DB PTHR13042
NCBI CDD KOG3493; Ubiquitin-like protein
KEGG Orthology K13113; UBL5, ubiquitin-like protein 5
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G45180 : Ubiquitin-like superfamily protein
RAP-DB (Rice) LOC_Os11g04880.1 : ubiquitin-like protein 5, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK00424 , KQJ92334
Barley HORVU4Hr1G025840.3 , HORVU4Hr1G025840.2 , HORVU4Hr1G025840.1 , HORVU5Hr1G042600.3 , HORVU5Hr1G042600.2 , HORVU5Hr1G042600.1
Wheat -
Populus PNT22578 , PNT22577 , PNT18102 , PNT18103


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cDNA sequences
Sobic.008G011600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
2 Sobic.001G536500 expressed protein -
3 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
4 Sobic.004G037600 molybdenum cofactor synthesis protein 2 large subunit, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
5 Sobic.001G445800 expressed protein -
6 Sobic.002G282400 expressed protein -
7 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
8 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
9 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
10 Sobic.001G281400 expressed protein -
11 Sobic.008G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone--flavonone isomerase, putative, expressed -
12 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
13 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
14 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
15 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
16 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.001G422900 zinc finger family protein, putative, expressed -
18 Sobic.005G195301 - K02980: RP-S29e, small subunit ribosomal protein S29e
19 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
20 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144


Gene co-expression network
sample Sobic008G011600 Sobic008G011600 Sobic003G181500 Sobic003G181500 Sobic008G011600--Sobic003G181500 Sobic001G536500 Sobic001G536500 Sobic008G011600--Sobic001G536500 Sobic001G390300 Sobic001G390300 Sobic008G011600--Sobic001G390300 Sobic004G037600 Sobic004G037600 Sobic008G011600--Sobic004G037600 Sobic001G445800 Sobic001G445800 Sobic008G011600--Sobic001G445800 Sobic002G282400 Sobic002G282400 Sobic008G011600--Sobic002G282400 Sobic009G023200 Sobic009G023200 Sobic008G011600--Sobic009G023200 Sobic001G288800 Sobic001G288800 Sobic008G011600--Sobic001G288800 Sobic010G041600 Sobic010G041600 Sobic008G011600--Sobic010G041600 Sobic004G187900 Sobic004G187900 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G249800 Sobic003G249800 Sobic003G181500--Sobic003G249800 Sobic003G181500--Sobic001G288800 Sobic001G281400 Sobic001G281400 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic002G046100 Sobic002G046100 Sobic003G181500--Sobic002G046100 Sobic010G204600 Sobic010G204600 Sobic001G536500--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic003G125650 Sobic003G125650 Sobic001G390300--Sobic003G125650 Sobic001G046100 Sobic001G046100 Sobic001G390300--Sobic001G046100 Sobic001G055600 Sobic001G055600 Sobic001G390300--Sobic001G055600 Sobic001G402050 Sobic001G402050 Sobic001G390300--Sobic001G402050 Sobic001G374700 Sobic001G374700 Sobic001G390300--Sobic001G374700 Sobic001G493001 Sobic001G493001 Sobic001G390300--Sobic001G493001 Sobic005G196800 Sobic005G196800 Sobic001G390300--Sobic005G196800 Sobic002G375100 Sobic002G375100 Sobic001G390300--Sobic002G375100 Sobic001G367600 Sobic001G367600 Sobic001G390300--Sobic001G367600 Sobic007G187800 Sobic007G187800 Sobic004G037600--Sobic007G187800 Sobic001G192200 Sobic001G192200 Sobic004G037600--Sobic001G192200 Sobic004G037600--Sobic008G011600 Sobic010G117900 Sobic010G117900 Sobic004G037600--Sobic010G117900 Sobic001G082200 Sobic001G082200 Sobic004G037600--Sobic001G082200 Sobic006G173900 Sobic006G173900 Sobic004G037600--Sobic006G173900 Sobic004G088551 Sobic004G088551 Sobic004G037600--Sobic004G088551 Sobic006G148900 Sobic006G148900 Sobic004G037600--Sobic006G148900 Sobic006G158600 Sobic006G158600 Sobic004G037600--Sobic006G158600 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic003G321700 Sobic003G321700 Sobic001G445800--Sobic003G321700 Sobic002G078400 Sobic002G078400 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic010G018400 Sobic010G018400 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic002G190900 Sobic002G190900 Sobic001G445800--Sobic002G190900 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic006G141500 Sobic006G141500 Sobic002G282400--Sobic006G141500 Sobic002G282400--Sobic003G181500 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic009G023200--Sobic004G187900 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic001G067601 Sobic001G067601 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic009G023200--Sobic005G196800 Sobic001G288800--Sobic003G181500 Sobic010G150575 Sobic010G150575 Sobic001G288800--Sobic010G150575 Sobic001G288800--Sobic001G281400 Sobic001G288800--Sobic003G350300 Sobic001G177800 Sobic001G177800 Sobic001G288800--Sobic001G177800 Sobic001G288800--Sobic010G243200 Sobic001G288800--Sobic003G321700 Sobic001G288800--Sobic004G187900 Sobic001G288800--Sobic006G173900 Sobic001G034700 Sobic001G034700 Sobic010G041600--Sobic001G034700 Sobic010G041600--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic010G041600--Sobic004G272800 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic001G086300 Sobic001G086300 Sobic010G041600--Sobic001G086300 Sobic010G178200 Sobic010G178200 Sobic010G041600--Sobic010G178200 Sobic010G041600--Sobic008G129400 Sobic007G051000 Sobic007G051000 Sobic010G041600--Sobic007G051000
Octagon: transcription factors


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