Gene annotation
Transcriptome id Sobic.004G037600.1
Synonym Sb04g003220
Functional annotation molybdenum cofactor synthesis protein 2 large subunit, putative, expressed
UniProt C5XUJ7
Pfam PF02391
Panther DB PTHR23404 PTHR23404:SF2
NCBI CDD KOG3307; Molybdopterin converting factor subunit 2
KEGG Orthology K03635; MOCS2B, molybdopterin synthase catalytic subunit
Gene Ontology GO:0006777; Mo-molybdopterin cofactor biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G43760 : molybdopterin biosynthesis MoaE family protein
RAP-DB (Rice) LOC_Os02g04740.1 : molybdenum cofactor synthesis protein 2 large subunit, putative, expressed
MaizeGDB (Corn) Zm00025a034897
Brachypodium KQJ90008
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G187800 mtN19, putative, expressed -
2 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.008G011600 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
4 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.001G082200 cytochrome P450, putative, expressed -
6 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
7 Sobic.004G088551 - -
8 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
9 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
10 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
12 Sobic.009G070400 expressed protein -
13 Sobic.001G423800 DNA binding protein, putative, expressed -
14 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
15 Sobic.002G139400 AP2 domain containing protein, expressed -
16 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
17 Sobic.003G362100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
18 Sobic.008G136400 expressed protein -
19 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.004G112300 - -


Gene co-expression network
sample Sobic004G037600 Sobic004G037600 Sobic007G187800 Sobic007G187800 Sobic004G037600--Sobic007G187800 Sobic001G192200 Sobic001G192200 Sobic004G037600--Sobic001G192200 Sobic008G011600 Sobic008G011600 Sobic004G037600--Sobic008G011600 Sobic010G117900 Sobic010G117900 Sobic004G037600--Sobic010G117900 Sobic001G082200 Sobic001G082200 Sobic004G037600--Sobic001G082200 Sobic006G173900 Sobic006G173900 Sobic004G037600--Sobic006G173900 Sobic004G088551 Sobic004G088551 Sobic004G037600--Sobic004G088551 Sobic006G148900 Sobic006G148900 Sobic004G037600--Sobic006G148900 Sobic006G158600 Sobic006G158600 Sobic004G037600--Sobic006G158600 Sobic003G078100 Sobic003G078100 Sobic007G187800--Sobic003G078100 Sobic009G008900 Sobic009G008900 Sobic007G187800--Sobic009G008900 Sobic007G025500 Sobic007G025500 Sobic007G187800--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic007G187800--Sobic008G136400 Sobic007G187800--Sobic006G158600 Sobic007G187800--Sobic006G173900 Sobic009G183400 Sobic009G183400 Sobic007G187800--Sobic009G183400 Sobic001G119400 Sobic001G119400 Sobic007G187800--Sobic001G119400 Sobic002G414600 Sobic002G414600 Sobic007G187800--Sobic002G414600 Sobic004G243100 Sobic004G243100 Sobic001G192200--Sobic004G243100 Sobic002G251000 Sobic002G251000 Sobic001G192200--Sobic002G251000 Sobic001G423800 Sobic001G423800 Sobic001G192200--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic001G192200--Sobic002G139400 Sobic007G227300 Sobic007G227300 Sobic001G192200--Sobic007G227300 Sobic009G224100 Sobic009G224100 Sobic001G192200--Sobic009G224100 Sobic010G084700 Sobic010G084700 Sobic001G192200--Sobic010G084700 Sobic010G084100 Sobic010G084100 Sobic001G192200--Sobic010G084100 Sobic003G200700 Sobic003G200700 Sobic001G192200--Sobic003G200700 Sobic003G181500 Sobic003G181500 Sobic008G011600--Sobic003G181500 Sobic001G536500 Sobic001G536500 Sobic008G011600--Sobic001G536500 Sobic001G390300 Sobic001G390300 Sobic008G011600--Sobic001G390300 Sobic008G011600--Sobic004G037600 Sobic001G445800 Sobic001G445800 Sobic008G011600--Sobic001G445800 Sobic002G282400 Sobic002G282400 Sobic008G011600--Sobic002G282400 Sobic009G023200 Sobic009G023200 Sobic008G011600--Sobic009G023200 Sobic001G288800 Sobic001G288800 Sobic008G011600--Sobic001G288800 Sobic010G041600 Sobic010G041600 Sobic008G011600--Sobic010G041600 Sobic005G101800 Sobic005G101800 Sobic010G117900--Sobic005G101800 Sobic003G252800 Sobic003G252800 Sobic010G117900--Sobic003G252800 Sobic010G117900--Sobic010G084700 Sobic010G117900--Sobic007G227300 Sobic004G221500 Sobic004G221500 Sobic010G117900--Sobic004G221500 Sobic010G084400 Sobic010G084400 Sobic010G117900--Sobic010G084400 Sobic007G067600 Sobic007G067600 Sobic010G117900--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic010G117900--Sobic002G195400 Sobic001G348700 Sobic001G348700 Sobic010G117900--Sobic001G348700 Sobic001G082200--Sobic001G192200 Sobic001G082200--Sobic001G423800 Sobic001G082200--Sobic002G139400 Sobic001G082200--Sobic004G088551 Sobic010G238600 Sobic010G238600 Sobic001G082200--Sobic010G238600 Sobic001G082200--Sobic004G243100 Sobic001G082200--Sobic003G078100 Sobic001G082200--Sobic009G224100 Sobic009G070400 Sobic009G070400 Sobic001G082200--Sobic009G070400 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic002G393000 Sobic002G393000 Sobic006G173900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic001G317000 Sobic001G317000 Sobic004G088551--Sobic001G317000 Sobic004G088551--Sobic002G195400 Sobic004G088551--Sobic005G101800 Sobic004G088551--Sobic007G067600 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic006G148900--Sobic001G423800 Sobic006G148900--Sobic010G084700 Sobic010G176600 Sobic010G176600 Sobic006G148900--Sobic010G176600 Sobic006G148900--Sobic004G221500 Sobic001G177800 Sobic001G177800 Sobic006G148900--Sobic001G177800 Sobic004G189400 Sobic004G189400 Sobic006G148900--Sobic004G189400 Sobic006G148900--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic006G148900--Sobic003G282901 Sobic004G216600 Sobic004G216600 Sobic006G148900--Sobic004G216600 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic002G140400 Sobic002G140400 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic001G038900 Sobic001G038900 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic006G158600--Sobic004G243100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.