Gene annotation
Transcriptome id Sobic.004G233400.1
Synonym
Functional annotation -
UniProt A0A194YSD2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
2 Sobic.003G254900 no apical meristem protein, putative, expressed -
3 Sobic.003G037500 WRKY107, expressed -
4 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
5 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
6 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
7 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
8 Sobic.010G192900 expressed protein -
9 Sobic.002G092801 - -
10 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
11 Sobic.006G246100 one cut domain family member 3, putative, expressed -
12 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
15 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G536500 expressed protein -
17 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
18 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
19 Sobic.003G250600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsGrx_I1 - glutaredoxin subgroup III, expressed -
20 Sobic.007G123300 C1-like domain containing protein, expressed -


Gene co-expression network
sample Sobic004G233400 Sobic004G233400 Sobic003G110200 Sobic003G110200 Sobic004G233400--Sobic003G110200 Sobic003G254900 Sobic003G254900 Sobic004G233400--Sobic003G254900 Sobic003G037500 Sobic003G037500 Sobic004G233400--Sobic003G037500 Sobic001G234800 Sobic001G234800 Sobic004G233400--Sobic001G234800 Sobic004G245100 Sobic004G245100 Sobic004G233400--Sobic004G245100 Sobic002G377100 Sobic002G377100 Sobic004G233400--Sobic002G377100 Sobic005G080200 Sobic005G080200 Sobic004G233400--Sobic005G080200 Sobic010G192900 Sobic010G192900 Sobic004G233400--Sobic010G192900 Sobic002G092801 Sobic002G092801 Sobic004G233400--Sobic002G092801 Sobic001G449700 Sobic001G449700 Sobic003G110200--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic003G110200--Sobic003G202200 Sobic007G149300 Sobic007G149300 Sobic003G110200--Sobic007G149300 Sobic003G110200--Sobic002G092801 Sobic003G102200 Sobic003G102200 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic001G192600 Sobic001G192600 Sobic003G254900--Sobic001G192600 Sobic009G221400 Sobic009G221400 Sobic003G254900--Sobic009G221400 Sobic006G274700 Sobic006G274700 Sobic003G254900--Sobic006G274700 Sobic002G192000 Sobic002G192000 Sobic003G254900--Sobic002G192000 Sobic006G158600 Sobic006G158600 Sobic003G254900--Sobic006G158600 Sobic003G254900--Sobic007G149300 Sobic003G254900--Sobic001G449700 Sobic003G254900--Sobic001G481100 Sobic003G254900--Sobic003G037500 Sobic003G285500 Sobic003G285500 Sobic003G037500--Sobic003G285500 Sobic003G192100 Sobic003G192100 Sobic003G037500--Sobic003G192100 Sobic001G367600 Sobic001G367600 Sobic003G037500--Sobic001G367600 Sobic001G231700 Sobic001G231700 Sobic003G037500--Sobic001G231700 Sobic003G037500--Sobic004G245100 Sobic002G353900 Sobic002G353900 Sobic003G037500--Sobic002G353900 Sobic003G228200 Sobic003G228200 Sobic003G037500--Sobic003G228200 Sobic007G155000 Sobic007G155000 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100 Sobic002G302500 Sobic002G302500 Sobic001G234800--Sobic002G302500 Sobic006G206000 Sobic006G206000 Sobic001G234800--Sobic006G206000 Sobic006G180100 Sobic006G180100 Sobic001G234800--Sobic006G180100 Sobic001G234800--Sobic002G353900 Sobic009G065300 Sobic009G065300 Sobic001G234800--Sobic009G065300 Sobic001G234800--Sobic009G221400 Sobic010G166500 Sobic010G166500 Sobic001G234800--Sobic010G166500 Sobic002G338500 Sobic002G338500 Sobic001G234800--Sobic002G338500 Sobic002G327300 Sobic002G327300 Sobic001G234800--Sobic002G327300 Sobic004G245100--Sobic003G037500 Sobic006G268800 Sobic006G268800 Sobic004G245100--Sobic006G268800 Sobic001G318500 Sobic001G318500 Sobic004G245100--Sobic001G318500 Sobic009G145500 Sobic009G145500 Sobic004G245100--Sobic009G145500 Sobic004G245100--Sobic003G228200 Sobic003G007600 Sobic003G007600 Sobic004G245100--Sobic003G007600 Sobic003G073380 Sobic003G073380 Sobic004G245100--Sobic003G073380 Sobic008G027600 Sobic008G027600 Sobic004G245100--Sobic008G027600 Sobic003G043600 Sobic003G043600 Sobic004G245100--Sobic003G043600 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic001G059400 Sobic001G059400 Sobic002G377100--Sobic001G059400 Sobic002G377100--Sobic003G254900 Sobic002G377100--Sobic003G102200 Sobic001G195100 Sobic001G195100 Sobic002G377100--Sobic001G195100 Sobic010G163000 Sobic010G163000 Sobic002G377100--Sobic010G163000 Sobic002G377100--Sobic001G449700 Sobic004G297100 Sobic004G297100 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic006G246100 Sobic006G246100 Sobic005G080200--Sobic006G246100 Sobic001G432700 Sobic001G432700 Sobic005G080200--Sobic001G432700 Sobic005G080200--Sobic001G192600 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic006G068800 Sobic006G068800 Sobic010G192900--Sobic006G068800 Sobic002G327100 Sobic002G327100 Sobic010G192900--Sobic002G327100 Sobic010G192900--Sobic003G037500 Sobic004G297900 Sobic004G297900 Sobic010G192900--Sobic004G297900 Sobic006G009000 Sobic006G009000 Sobic010G192900--Sobic006G009000 Sobic006G009100 Sobic006G009100 Sobic010G192900--Sobic006G009100 Sobic010G192900--Sobic003G228200 Sobic006G255400 Sobic006G255400 Sobic010G192900--Sobic006G255400 Sobic003G311800 Sobic003G311800 Sobic010G192900--Sobic003G311800 Sobic002G092801--Sobic003G110200 Sobic002G092801--Sobic001G449700 Sobic002G092801--Sobic003G102200 Sobic002G092801--Sobic003G021500 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic002G092801--Sobic003G202200 Sobic002G034500 Sobic002G034500 Sobic002G092801--Sobic002G034500 Sobic002G092801--Sobic007G149300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.