Gene annotation
Transcriptome id Sobic.003G265400.1
Synonym MTO2, TS, Sb03g031880
Functional annotation threonine synthase, chloroplast precursor, putative, expressed
UniProt A0A1W0VZ25
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF121
NCBI CDD -
KEGG Orthology K01733; threonine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29840 : Pyridoxal-5\'-phosphate-dependent enzyme family protein
RAP-DB (Rice) LOC_Os01g49890.1 : threonine synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044447 , Zm00025a020201 , Zm00025a032252 , Zm00025a043178 , Zm00025a027929
Brachypodium KQK05047 , KQK09295
Barley HORVU3Hr1G064730.1 , HORVU3Hr1G064730.2 , HORVU1Hr1G082660.1
Wheat TraesCS3A02G259700 , TraesCS3B02G292900 , TraesCS1B02G391900 , TraesCS3D02G259800
Populus -


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cDNA sequences
Sobic.003G265400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217600 expressed protein -
2 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
3 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.001G193200 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
5 Sobic.005G168700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.001G131400 thioesterase family protein, putative, expressed -
7 Sobic.006G281200 csAtPR5, putative, expressed -
8 Sobic.003G291400 dehydrogenase, putative, expressed -
9 Sobic.006G206700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@leucine rich repeat containing protein, expressed -
10 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
11 Sobic.003G375600 - -
12 Sobic.006G168300 "NUDIX family, domain containing protein"("PubMedID : 26759170,PubMedID : 24597475")@hydrolase, NUDIX family, domain containing protein, expressed -
13 Sobic.001G006400 DANA2, putative, expressed -
14 Sobic.001G087900 expressed protein -
15 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
16 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
17 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
18 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
19 Sobic.004G184700 expressed protein -
20 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC


Gene co-expression network
sample Sobic003G265400 Sobic003G265400 Sobic004G217600 Sobic004G217600 Sobic003G265400--Sobic004G217600 Sobic003G369500 Sobic003G369500 Sobic003G265400--Sobic003G369500 Sobic009G131100 Sobic009G131100 Sobic003G265400--Sobic009G131100 Sobic001G193200 Sobic001G193200 Sobic003G265400--Sobic001G193200 Sobic005G168700 Sobic005G168700 Sobic003G265400--Sobic005G168700 Sobic001G131400 Sobic001G131400 Sobic003G265400--Sobic001G131400 Sobic006G281200 Sobic006G281200 Sobic003G265400--Sobic006G281200 Sobic003G291400 Sobic003G291400 Sobic003G265400--Sobic003G291400 Sobic006G206700 Sobic006G206700 Sobic003G265400--Sobic006G206700 Sobic004G217600--Sobic009G131100 Sobic004G217600--Sobic006G281200 Sobic004G217600--Sobic003G265400 Sobic010G216200 Sobic010G216200 Sobic004G217600--Sobic010G216200 Sobic004G060600 Sobic004G060600 Sobic004G217600--Sobic004G060600 Sobic004G217600--Sobic003G369500 Sobic001G447900 Sobic001G447900 Sobic004G217600--Sobic001G447900 Sobic005G127100 Sobic005G127100 Sobic004G217600--Sobic005G127100 Sobic003G277000 Sobic003G277000 Sobic004G217600--Sobic003G277000 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G369500--Sobic003G277000 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic001G193200--Sobic003G265400 Sobic007G033800 Sobic007G033800 Sobic001G193200--Sobic007G033800 Sobic002G111200 Sobic002G111200 Sobic001G193200--Sobic002G111200 Sobic004G212500 Sobic004G212500 Sobic001G193200--Sobic004G212500 Sobic005G033200 Sobic005G033200 Sobic001G193200--Sobic005G033200 Sobic004G130100 Sobic004G130100 Sobic001G193200--Sobic004G130100 Sobic001G388600 Sobic001G388600 Sobic001G193200--Sobic001G388600 Sobic002G339600 Sobic002G339600 Sobic001G193200--Sobic002G339600 Sobic003G440800 Sobic003G440800 Sobic001G193200--Sobic003G440800 Sobic002G369800 Sobic002G369800 Sobic005G168700--Sobic002G369800 Sobic001G042301 Sobic001G042301 Sobic005G168700--Sobic001G042301 Sobic005G168700--Sobic001G131400 Sobic005G168700--Sobic003G265400 Sobic009G207100 Sobic009G207100 Sobic005G168700--Sobic009G207100 Sobic010G074600 Sobic010G074600 Sobic005G168700--Sobic010G074600 Sobic005G099500 Sobic005G099500 Sobic005G168700--Sobic005G099500 Sobic001G532300 Sobic001G532300 Sobic005G168700--Sobic001G532300 Sobic009G114500 Sobic009G114500 Sobic005G168700--Sobic009G114500 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic001G131400--Sobic010G135000 Sobic006G281200--Sobic001G428100 Sobic003G003000 Sobic003G003000 Sobic006G281200--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic006G281200--Sobic001G025600 Sobic006G281200--Sobic009G131100 Sobic006G281200--Sobic007G091000 Sobic001G404100 Sobic001G404100 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic009G130400 Sobic009G130400 Sobic006G281200--Sobic009G130400 Sobic010G089200 Sobic010G089200 Sobic003G291400--Sobic010G089200 Sobic001G321600 Sobic001G321600 Sobic003G291400--Sobic001G321600 Sobic005G089000 Sobic005G089000 Sobic003G291400--Sobic005G089000 Sobic002G281000 Sobic002G281000 Sobic003G291400--Sobic002G281000 Sobic006G131800 Sobic006G131800 Sobic003G291400--Sobic006G131800 Sobic002G195700 Sobic002G195700 Sobic003G291400--Sobic002G195700 Sobic002G281800 Sobic002G281800 Sobic003G291400--Sobic002G281800 Sobic001G005500 Sobic001G005500 Sobic003G291400--Sobic001G005500 Sobic005G021600 Sobic005G021600 Sobic003G291400--Sobic005G021600 Sobic003G325500 Sobic003G325500 Sobic006G206700--Sobic003G325500 Sobic009G036800 Sobic009G036800 Sobic006G206700--Sobic009G036800 Sobic006G206700--Sobic001G428200 Sobic001G128100 Sobic001G128100 Sobic006G206700--Sobic001G128100 Sobic003G253800 Sobic003G253800 Sobic006G206700--Sobic003G253800 Sobic004G209900 Sobic004G209900 Sobic006G206700--Sobic004G209900 Sobic006G206700--Sobic003G369500 Sobic006G206700--Sobic009G131100 Sobic006G168300 Sobic006G168300 Sobic006G206700--Sobic006G168300
Octagon: transcription factors


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