Gene annotation
Transcriptome id Sobic.006G206700.1,Sobic.006G206700.2
Synonym PIRL8, Sb06g027760
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
leucine rich repeat containing protein, expressed
UniProt C5YFI7
Pfam PF00560
Panther DB PTHR23155
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G19330 : plant intracellular ras group-related LRR 6
RAP-DB (Rice) LOC_Os04g51580.2 : leucine rich repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a009894
Brachypodium KQJ84440 , KQJ84439 , KQJ84438
Barley HORVU2Hr1G101090.9 , HORVU2Hr1G101090.8 , HORVU2Hr1G101090.7 , HORVU2Hr1G101090.6 , HORVU2Hr1G101090.5 , HORVU2Hr1G101090.4 , HORVU2Hr1G101090.3 , HORVU2Hr1G101090.2 , HORVU2Hr1G101090.1
Wheat TraesCS2B02G454100 , TraesCS2A02G432800 , TraesCS2D02G430800
Populus -


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cDNA sequences
Sobic.006G206700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
2 Sobic.009G036800 expressed protein -
3 Sobic.001G428200 expressed protein -
4 Sobic.001G128100 expressed protein -
5 Sobic.003G253800 OsFBT1 - F-box and tubby domain containing protein, expressed -
6 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
7 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
8 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
9 Sobic.006G168300 "NUDIX family, domain containing protein"("PubMedID : 26759170,PubMedID : 24597475")@hydrolase, NUDIX family, domain containing protein, expressed -
10 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
11 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
12 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.006G123300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
14 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
15 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
17 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
18 Sobic.009G142800 amino acid transporter, putative, expressed -
19 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.009G232266 - -


Gene co-expression network
sample Sobic006G206700 Sobic006G206700 Sobic003G325500 Sobic003G325500 Sobic006G206700--Sobic003G325500 Sobic009G036800 Sobic009G036800 Sobic006G206700--Sobic009G036800 Sobic001G428200 Sobic001G428200 Sobic006G206700--Sobic001G428200 Sobic001G128100 Sobic001G128100 Sobic006G206700--Sobic001G128100 Sobic003G253800 Sobic003G253800 Sobic006G206700--Sobic003G253800 Sobic004G209900 Sobic004G209900 Sobic006G206700--Sobic004G209900 Sobic003G369500 Sobic003G369500 Sobic006G206700--Sobic003G369500 Sobic009G131100 Sobic009G131100 Sobic006G206700--Sobic009G131100 Sobic006G168300 Sobic006G168300 Sobic006G206700--Sobic006G168300 Sobic003G325500--Sobic001G428200 Sobic003G003000 Sobic003G003000 Sobic003G325500--Sobic003G003000 Sobic003G325500--Sobic006G206700 Sobic001G087900 Sobic001G087900 Sobic003G325500--Sobic001G087900 Sobic004G028000 Sobic004G028000 Sobic003G325500--Sobic004G028000 Sobic003G417000 Sobic003G417000 Sobic003G325500--Sobic003G417000 Sobic003G325500--Sobic003G369500 Sobic005G055000 Sobic005G055000 Sobic003G325500--Sobic005G055000 Sobic006G281200 Sobic006G281200 Sobic003G325500--Sobic006G281200 Sobic005G107300 Sobic005G107300 Sobic009G036800--Sobic005G107300 Sobic009G036800--Sobic006G206700 Sobic009G036800--Sobic003G325500 Sobic004G245200 Sobic004G245200 Sobic009G036800--Sobic004G245200 Sobic004G179700 Sobic004G179700 Sobic009G036800--Sobic004G179700 Sobic001G093900 Sobic001G093900 Sobic009G036800--Sobic001G093900 Sobic002G369800 Sobic002G369800 Sobic009G036800--Sobic002G369800 Sobic001G353600 Sobic001G353600 Sobic009G036800--Sobic001G353600 Sobic003G075000 Sobic003G075000 Sobic009G036800--Sobic003G075000 Sobic001G428200--Sobic001G087900 Sobic004G351500 Sobic004G351500 Sobic001G428200--Sobic004G351500 Sobic001G428200--Sobic009G131100 Sobic001G428200--Sobic003G369500 Sobic001G428200--Sobic001G353600 Sobic001G428200--Sobic003G325500 Sobic004G225500 Sobic004G225500 Sobic001G428200--Sobic004G225500 Sobic004G060600 Sobic004G060600 Sobic001G428200--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428200--Sobic009G198500 Sobic005G175300 Sobic005G175300 Sobic001G128100--Sobic005G175300 Sobic001G128100--Sobic003G253800 Sobic006G265000 Sobic006G265000 Sobic001G128100--Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic001G128100--Sobic001G314800 Sobic001G128100--Sobic003G325500 Sobic001G128100--Sobic003G369500 Sobic001G128100--Sobic001G428200 Sobic002G073900 Sobic002G073900 Sobic001G128100--Sobic002G073900 Sobic007G196600 Sobic007G196600 Sobic001G128100--Sobic007G196600 Sobic003G253800--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic003G253800--Sobic006G054500 Sobic001G162100 Sobic001G162100 Sobic003G253800--Sobic001G162100 Sobic003G253800--Sobic001G128100 Sobic002G431600 Sobic002G431600 Sobic003G253800--Sobic002G431600 Sobic007G079700 Sobic007G079700 Sobic003G253800--Sobic007G079700 Sobic001G283500 Sobic001G283500 Sobic003G253800--Sobic001G283500 Sobic010G267500 Sobic010G267500 Sobic003G253800--Sobic010G267500 Sobic005G095900 Sobic005G095900 Sobic003G253800--Sobic005G095900 Sobic008G189300 Sobic008G189300 Sobic004G209900--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic004G209900--Sobic010G135000 Sobic010G037300 Sobic010G037300 Sobic004G209900--Sobic010G037300 Sobic006G180200 Sobic006G180200 Sobic004G209900--Sobic006G180200 Sobic005G228000 Sobic005G228000 Sobic004G209900--Sobic005G228000 Sobic003G130800 Sobic003G130800 Sobic004G209900--Sobic003G130800 Sobic002G212200 Sobic002G212200 Sobic004G209900--Sobic002G212200 Sobic004G209900--Sobic005G095900 Sobic001G220400 Sobic001G220400 Sobic004G209900--Sobic001G220400 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic003G369500--Sobic009G131100 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic009G131100--Sobic003G277000 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic009G190800 Sobic009G190800 Sobic006G168300--Sobic009G190800 Sobic006G168300--Sobic007G044300 Sobic006G168300--Sobic002G369800 Sobic001G530350 Sobic001G530350 Sobic006G168300--Sobic001G530350 Sobic003G359900 Sobic003G359900 Sobic006G168300--Sobic003G359900 Sobic009G192100 Sobic009G192100 Sobic006G168300--Sobic009G192100 Sobic006G168300--Sobic006G206700 Sobic001G343900 Sobic001G343900 Sobic006G168300--Sobic001G343900 Sobic006G168300--Sobic006G265000
Octagon: transcription factors


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