Gene annotation
Transcriptome id Sobic.001G128100.2,Sobic.001G128100.1,Sobic.001G128100.3
Synonym Sb01g011230
Functional annotation expressed protein
UniProt C5WNW9 , A0A1Z5S5F7 , A0A1Z5S5G1
Pfam PF03168
Panther DB PTHR31234 PTHR31234:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13270 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os03g48950.1 : expressed protein
MaizeGDB (Corn) Zm00025a017069 , Zm00025a007698
Brachypodium KQK13682
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G175300 expressed protein -
2 Sobic.003G253800 OsFBT1 - F-box and tubby domain containing protein, expressed -
3 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
4 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
5 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
7 Sobic.001G428200 expressed protein -
8 Sobic.002G073900 expressed protein -
9 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
10 Sobic.005G037900 sialyltransferase family domain containing protein, expressed -
11 Sobic.006G206700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@leucine rich repeat containing protein, expressed -
12 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
14 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
15 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
16 Sobic.003G262100 expressed protein -
17 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
18 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
19 Sobic.010G094800 pro-resilin precursor, putative, expressed -
20 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein


Gene co-expression network
sample Sobic001G128100 Sobic001G128100 Sobic005G175300 Sobic005G175300 Sobic001G128100--Sobic005G175300 Sobic003G253800 Sobic003G253800 Sobic001G128100--Sobic003G253800 Sobic006G265000 Sobic006G265000 Sobic001G128100--Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic001G128100--Sobic001G314800 Sobic003G325500 Sobic003G325500 Sobic001G128100--Sobic003G325500 Sobic003G369500 Sobic003G369500 Sobic001G128100--Sobic003G369500 Sobic001G428200 Sobic001G428200 Sobic001G128100--Sobic001G428200 Sobic002G073900 Sobic002G073900 Sobic001G128100--Sobic002G073900 Sobic007G196600 Sobic007G196600 Sobic001G128100--Sobic007G196600 Sobic005G175300--Sobic001G128100 Sobic010G185600 Sobic010G185600 Sobic005G175300--Sobic010G185600 Sobic001G084000 Sobic001G084000 Sobic005G175300--Sobic001G084000 Sobic010G118100 Sobic010G118100 Sobic005G175300--Sobic010G118100 Sobic005G072200 Sobic005G072200 Sobic005G175300--Sobic005G072200 Sobic005G175300--Sobic003G253800 Sobic010G094800 Sobic010G094800 Sobic005G175300--Sobic010G094800 Sobic004G092000 Sobic004G092000 Sobic005G175300--Sobic004G092000 Sobic003G339900 Sobic003G339900 Sobic005G175300--Sobic003G339900 Sobic004G060600 Sobic004G060600 Sobic003G253800--Sobic004G060600 Sobic006G054500 Sobic006G054500 Sobic003G253800--Sobic006G054500 Sobic001G162100 Sobic001G162100 Sobic003G253800--Sobic001G162100 Sobic003G253800--Sobic001G128100 Sobic002G431600 Sobic002G431600 Sobic003G253800--Sobic002G431600 Sobic007G079700 Sobic007G079700 Sobic003G253800--Sobic007G079700 Sobic001G283500 Sobic001G283500 Sobic003G253800--Sobic001G283500 Sobic010G267500 Sobic010G267500 Sobic003G253800--Sobic010G267500 Sobic005G095900 Sobic005G095900 Sobic003G253800--Sobic005G095900 Sobic006G265000--Sobic001G314800 Sobic006G014700 Sobic006G014700 Sobic006G265000--Sobic006G014700 Sobic010G214200 Sobic010G214200 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic003G310500 Sobic003G310500 Sobic006G265000--Sobic003G310500 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic001G314800--Sobic006G014700 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic003G325500--Sobic001G428200 Sobic003G003000 Sobic003G003000 Sobic003G325500--Sobic003G003000 Sobic006G206700 Sobic006G206700 Sobic003G325500--Sobic006G206700 Sobic001G087900 Sobic001G087900 Sobic003G325500--Sobic001G087900 Sobic004G028000 Sobic004G028000 Sobic003G325500--Sobic004G028000 Sobic003G417000 Sobic003G417000 Sobic003G325500--Sobic003G417000 Sobic003G325500--Sobic003G369500 Sobic005G055000 Sobic005G055000 Sobic003G325500--Sobic005G055000 Sobic006G281200 Sobic006G281200 Sobic003G325500--Sobic006G281200 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic001G428200--Sobic001G087900 Sobic004G351500 Sobic004G351500 Sobic001G428200--Sobic004G351500 Sobic001G428200--Sobic009G131100 Sobic001G428200--Sobic003G369500 Sobic001G353600 Sobic001G353600 Sobic001G428200--Sobic001G353600 Sobic001G428200--Sobic003G325500 Sobic004G225500 Sobic004G225500 Sobic001G428200--Sobic004G225500 Sobic001G428200--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428200--Sobic009G198500 Sobic003G308700 Sobic003G308700 Sobic002G073900--Sobic003G308700 Sobic002G073900--Sobic005G072200 Sobic006G042200 Sobic006G042200 Sobic002G073900--Sobic006G042200 Sobic007G054100 Sobic007G054100 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic002G073900--Sobic004G092000 Sobic009G008100 Sobic009G008100 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic010G009400 Sobic010G009400 Sobic002G073900--Sobic010G009400 Sobic002G118600 Sobic002G118600 Sobic007G196600--Sobic002G118600 Sobic001G343900 Sobic001G343900 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G196600--Sobic007G044300 Sobic006G044932 Sobic006G044932 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic001G410100 Sobic001G410100 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic002G222800 Sobic002G222800 Sobic007G196600--Sobic002G222800
Octagon: transcription factors


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