Gene annotation
Transcriptome id Sobic.007G044300.1
Synonym Sb07g003690, CHL1, NRT1, ATNRT1, NRT1.1, CHL1-1, B-1
Functional annotation similar to Os08g0155400 protein (PubMedID : 29862293)
peptide transporter PTR2, putative, expressed
UniProt C5YGZ1
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF78
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G12110 : nitrate transporter 1.1
RAP-DB (Rice) LOC_Os08g05910.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a055174 , Zm00025a003351 , Zm00025a000114
Brachypodium KQJ97753 , KQJ97754 , KQK24132 , KQJ95347
Barley HORVU1Hr1G054020.2 , HORVU5Hr1G099170.1 , HORVU5Hr1G099170.3 , HORVU5Hr1G099170.2 , HORVU5Hr1G099170.5 , HORVU5Hr1G099170.4 , HORVU5Hr1G099170.7 , HORVU5Hr1G099170.6 , HORVU7Hr1G071600.9 , HORVU7Hr1G071600.8 , HORVU7Hr1G071600.3 , HORVU7Hr1G071600.1 , HORVU7Hr1G071600.7 , HORVU7Hr1G071600.6 , HORVU7Hr1G071600.5 , HORVU7Hr1G071600.4 , HORVU7Hr1G068560.13 , HORVU4Hr1G088020.12 , HORVU4Hr1G088020.4 , HORVU4Hr1G088020.5 , HORVU4Hr1G088020.6 , HORVU4Hr1G088020.7 , HORVU4Hr1G088020.1 , HORVU4Hr1G088020.2 , HORVU4Hr1G088020.3 , HORVU4Hr1G088020.8 , HORVU4Hr1G088020.9 , HORVU4Hr1G088020.13 , HORVU4Hr1G088020.10 , HORVU4Hr1G088020.11 , HORVU1Hr1G053990.10 , HORVU7Hr1G071600.12 , HORVU7Hr1G071600.11 , HORVU7Hr1G071600.10 , HORVU1Hr1G054020.4 , HORVU1Hr1G054020.5 , HORVU1Hr1G054020.3 , HORVU7Hr1G071600.2 , HORVU7Hr1G068560.12 , HORVU1Hr1G053990.1 , HORVU1Hr1G053990.3 , HORVU1Hr1G053990.2 , HORVU1Hr1G053990.5 , HORVU1Hr1G053990.4 , HORVU1Hr1G053990.7 , HORVU1Hr1G053990.6 , HORVU1Hr1G053990.9 , HORVU1Hr1G053990.8
Wheat TraesCS1A02G031300 , TraesCS2A02G335800 , TraesCS2A02G335800 , TraesCS5D02G419200 , TraesCS5D02G419200 , TraesCS7D02G297000 , TraesCS1B02G224900 , TraesCS7B02G201900 , TraesCS1A02G211000 , TraesCS5A02G537100 , TraesCS1A02G210900 , TraesCS1D02G032700 , TraesCS7A02G301700 , TraesCS4B02G375800 , TraesCS1D02G214300 , TraesCS2B02G346100 , TraesCS2D02G327000 , TraesCS5B02G414000 , TraesCS5B02G414000 , TraesCS5B02G414000 , TraesCS1D02G214200 , TraesCS1B02G225000 , TraesCS4D02G361500
Populus -


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cDNA sequences
Sobic.007G044300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
3 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
4 Sobic.007G006600 expressed protein -
5 Sobic.001G162100 WRKY94, expressed -
6 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
8 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
9 Sobic.002G333600 universal stress protein domain containing protein, putative, expressed -
10 Sobic.007G195701 - -
11 Sobic.003G141000 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
12 Sobic.001G285000 - -
13 Sobic.001G450700 RHsf 8/ Hsf 3(PubMedID : 27006630)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.006G044932 - -
15 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
16 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
17 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
18 Sobic.002G057600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G168300 "NUDIX family, domain containing protein"("PubMedID : 26759170,PubMedID : 24597475")@hydrolase, NUDIX family, domain containing protein, expressed -
20 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25


Gene co-expression network
sample Sobic007G044300 Sobic007G044300 Sobic001G343900 Sobic001G343900 Sobic007G044300--Sobic001G343900 Sobic007G196600 Sobic007G196600 Sobic007G044300--Sobic007G196600 Sobic003G369500 Sobic003G369500 Sobic007G044300--Sobic003G369500 Sobic007G006600 Sobic007G006600 Sobic007G044300--Sobic007G006600 Sobic001G162100 Sobic001G162100 Sobic007G044300--Sobic001G162100 Sobic001G410100 Sobic001G410100 Sobic007G044300--Sobic001G410100 Sobic006G265000 Sobic006G265000 Sobic007G044300--Sobic006G265000 Sobic001G216300 Sobic001G216300 Sobic007G044300--Sobic001G216300 Sobic002G333600 Sobic002G333600 Sobic007G044300--Sobic002G333600 Sobic006G044932 Sobic006G044932 Sobic001G343900--Sobic006G044932 Sobic002G407700 Sobic002G407700 Sobic001G343900--Sobic002G407700 Sobic001G343900--Sobic007G196600 Sobic001G343900--Sobic007G044300 Sobic005G228000 Sobic005G228000 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic002G118600 Sobic002G118600 Sobic007G196600--Sobic002G118600 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G196600--Sobic007G044300 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic007G196600--Sobic002G222800 Sobic004G060600 Sobic004G060600 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic003G367300 Sobic003G367300 Sobic007G006600--Sobic003G367300 Sobic007G006600--Sobic002G118600 Sobic001G450700 Sobic001G450700 Sobic007G006600--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic007G006600--Sobic007G169200 Sobic002G293300 Sobic002G293300 Sobic007G006600--Sobic002G293300 Sobic002G330300 Sobic002G330300 Sobic007G006600--Sobic002G330300 Sobic010G094600 Sobic010G094600 Sobic007G006600--Sobic010G094600 Sobic007G188100 Sobic007G188100 Sobic007G006600--Sobic007G188100 Sobic001G147200 Sobic001G147200 Sobic007G006600--Sobic001G147200 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic002G207300 Sobic002G207300 Sobic001G410100--Sobic002G207300 Sobic003G341100 Sobic003G341100 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic009G100500 Sobic009G100500 Sobic001G410100--Sobic009G100500 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic004G065900 Sobic004G065900 Sobic001G410100--Sobic004G065900 Sobic001G314800 Sobic001G314800 Sobic006G265000--Sobic001G314800 Sobic006G014700 Sobic006G014700 Sobic006G265000--Sobic006G014700 Sobic010G214200 Sobic010G214200 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic003G310500 Sobic003G310500 Sobic006G265000--Sobic003G310500 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic001G216300--Sobic001G314700 Sobic006G205200 Sobic006G205200 Sobic001G216300--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic001G216300--Sobic001G161200 Sobic001G216300--Sobic007G196600 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic006G146500 Sobic006G146500 Sobic001G216300--Sobic006G146500 Sobic004G006500 Sobic004G006500 Sobic001G216300--Sobic004G006500 Sobic004G157000 Sobic004G157000 Sobic002G333600--Sobic004G157000 Sobic002G333600--Sobic007G195701 Sobic010G204600 Sobic010G204600 Sobic002G333600--Sobic010G204600 Sobic006G010600 Sobic006G010600 Sobic002G333600--Sobic006G010600 Sobic006G182100 Sobic006G182100 Sobic002G333600--Sobic006G182100 Sobic001G433400 Sobic001G433400 Sobic002G333600--Sobic001G433400 Sobic001G095300 Sobic001G095300 Sobic002G333600--Sobic001G095300 Sobic003G181500 Sobic003G181500 Sobic002G333600--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic002G333600--Sobic002G078400
Octagon: transcription factors


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