Gene annotation
Transcriptome id Sobic.001G450700.1
Synonym Sb01g042370, HSF1, ATHSFA1A, ATHSF1, Heat shock transcription factor 08, SbHsf08, HSFA1A
Functional annotation RHsf 8/ Hsf 3 (PubMedID : 27006630)
HSF-type DNA-binding domain containing protein, expressed
UniProt C5WSM1
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF175
NCBI CDD KOG0627; Heat shock transcription factor
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G17750 : heat shock factor 1
RAP-DB (Rice) LOC_Os03g12370.1 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001383 , Zm00025a053025
Brachypodium KQK22792
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G141000 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
2 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
3 Sobic.007G006600 expressed protein -
4 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
5 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
6 Sobic.001G436000 expressed protein -
7 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
8 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
9 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
10 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
11 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.001G440700 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
13 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
15 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
16 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
17 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
18 Sobic.006G261300 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
19 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2


Gene co-expression network
sample Sobic001G450700 Sobic001G450700 Sobic003G141000 Sobic003G141000 Sobic001G450700--Sobic003G141000 Sobic007G169200 Sobic007G169200 Sobic001G450700--Sobic007G169200 Sobic007G006600 Sobic007G006600 Sobic001G450700--Sobic007G006600 Sobic001G220400 Sobic001G220400 Sobic001G450700--Sobic001G220400 Sobic003G369500 Sobic003G369500 Sobic001G450700--Sobic003G369500 Sobic001G436000 Sobic001G436000 Sobic001G450700--Sobic001G436000 Sobic010G232100 Sobic010G232100 Sobic001G450700--Sobic010G232100 Sobic007G196600 Sobic007G196600 Sobic001G450700--Sobic007G196600 Sobic002G293300 Sobic002G293300 Sobic001G450700--Sobic002G293300 Sobic003G141000--Sobic001G450700 Sobic003G141000--Sobic007G169200 Sobic001G410100 Sobic001G410100 Sobic003G141000--Sobic001G410100 Sobic002G207300 Sobic002G207300 Sobic003G141000--Sobic002G207300 Sobic001G386000 Sobic001G386000 Sobic003G141000--Sobic001G386000 Sobic003G141000--Sobic001G436000 Sobic003G141000--Sobic007G196600 Sobic003G290100 Sobic003G290100 Sobic003G141000--Sobic003G290100 Sobic003G141000--Sobic007G006600 Sobic002G197600 Sobic002G197600 Sobic007G169200--Sobic002G197600 Sobic007G169200--Sobic002G207300 Sobic002G330300 Sobic002G330300 Sobic007G169200--Sobic002G330300 Sobic002G118600 Sobic002G118600 Sobic007G169200--Sobic002G118600 Sobic007G011000 Sobic007G011000 Sobic007G169200--Sobic007G011000 Sobic001G403600 Sobic001G403600 Sobic007G169200--Sobic001G403600 Sobic007G169200--Sobic003G141000 Sobic007G169200--Sobic001G386000 Sobic007G169200--Sobic001G450700 Sobic003G367300 Sobic003G367300 Sobic007G006600--Sobic003G367300 Sobic007G006600--Sobic002G118600 Sobic007G006600--Sobic001G450700 Sobic007G006600--Sobic007G169200 Sobic007G006600--Sobic002G293300 Sobic007G006600--Sobic002G330300 Sobic010G094600 Sobic010G094600 Sobic007G006600--Sobic010G094600 Sobic007G188100 Sobic007G188100 Sobic007G006600--Sobic007G188100 Sobic001G147200 Sobic001G147200 Sobic007G006600--Sobic001G147200 Sobic010G188100 Sobic010G188100 Sobic001G220400--Sobic010G188100 Sobic009G219900 Sobic009G219900 Sobic001G220400--Sobic009G219900 Sobic010G101500 Sobic010G101500 Sobic001G220400--Sobic010G101500 Sobic003G077900 Sobic003G077900 Sobic001G220400--Sobic003G077900 Sobic003G367451 Sobic003G367451 Sobic001G220400--Sobic003G367451 Sobic003G220600 Sobic003G220600 Sobic001G220400--Sobic003G220600 Sobic009G001400 Sobic009G001400 Sobic001G220400--Sobic009G001400 Sobic006G163000 Sobic006G163000 Sobic001G220400--Sobic006G163000 Sobic002G122700 Sobic002G122700 Sobic001G220400--Sobic002G122700 Sobic004G060600 Sobic004G060600 Sobic003G369500--Sobic004G060600 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic002G379400 Sobic002G379400 Sobic001G436000--Sobic002G379400 Sobic001G436000--Sobic002G293300 Sobic004G025000 Sobic004G025000 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G081600 Sobic001G081600 Sobic001G436000--Sobic001G081600 Sobic001G436000--Sobic002G330300 Sobic001G436000--Sobic003G367300 Sobic006G205200 Sobic006G205200 Sobic001G436000--Sobic006G205200 Sobic002G344700 Sobic002G344700 Sobic001G436000--Sobic002G344700 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic006G099700 Sobic006G099700 Sobic010G232100--Sobic006G099700 Sobic007G196600--Sobic002G118600 Sobic001G343900 Sobic001G343900 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G196600--Sobic007G044300 Sobic006G044932 Sobic006G044932 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic007G196600--Sobic001G410100 Sobic007G196600--Sobic009G046600 Sobic002G222800 Sobic002G222800 Sobic007G196600--Sobic002G222800 Sobic002G293300--Sobic003G367300 Sobic002G293300--Sobic001G436000 Sobic002G293300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G293300--Sobic010G052800 Sobic009G231200 Sobic009G231200 Sobic002G293300--Sobic009G231200 Sobic002G293300--Sobic002G330300 Sobic001G082900 Sobic001G082900 Sobic002G293300--Sobic001G082900 Sobic002G293300--Sobic004G025000 Sobic001G516100 Sobic001G516100 Sobic002G293300--Sobic001G516100
Octagon: transcription factors


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