Gene annotation
Transcriptome id Sobic.001G436000.1
Synonym Sb01g041020
Functional annotation expressed protein
UniProt C5WQX3
Pfam -
Panther DB PTHR33306 PTHR33306:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21180 : -
RAP-DB (Rice) LOC_Os03g14570.2 : expressed protein
MaizeGDB (Corn) Zm00025a052876
Brachypodium KQK22560
Barley HORVU4Hr1G062970.2 , HORVU4Hr1G062970.3 , HORVU4Hr1G062970.1 , HORVU4Hr1G062970.6 , HORVU4Hr1G062970.4 , HORVU4Hr1G062970.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
2 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
3 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
6 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
7 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
8 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G344700 remorin, putative, expressed -
10 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
12 Sobic.001G450700 RHsf 8/ Hsf 3(PubMedID : 27006630)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
13 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
14 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
15 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
16 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
17 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
20 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase


Gene co-expression network
sample Sobic001G436000 Sobic001G436000 Sobic002G379400 Sobic002G379400 Sobic001G436000--Sobic002G379400 Sobic002G293300 Sobic002G293300 Sobic001G436000--Sobic002G293300 Sobic004G025000 Sobic004G025000 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G081600 Sobic001G081600 Sobic001G436000--Sobic001G081600 Sobic002G330300 Sobic002G330300 Sobic001G436000--Sobic002G330300 Sobic003G367300 Sobic003G367300 Sobic001G436000--Sobic003G367300 Sobic006G205200 Sobic006G205200 Sobic001G436000--Sobic006G205200 Sobic002G344700 Sobic002G344700 Sobic001G436000--Sobic002G344700 Sobic002G379400--Sobic004G025000 Sobic002G379400--Sobic002G330300 Sobic003G338900 Sobic003G338900 Sobic002G379400--Sobic003G338900 Sobic008G016900 Sobic008G016900 Sobic002G379400--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G379400--Sobic010G228000 Sobic002G118600 Sobic002G118600 Sobic002G379400--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G379400--Sobic006G263100 Sobic002G379400--Sobic001G436000 Sobic002G294700 Sobic002G294700 Sobic002G379400--Sobic002G294700 Sobic002G293300--Sobic003G367300 Sobic002G293300--Sobic001G436000 Sobic002G293300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G293300--Sobic010G052800 Sobic009G231200 Sobic009G231200 Sobic002G293300--Sobic009G231200 Sobic002G293300--Sobic002G330300 Sobic001G082900 Sobic001G082900 Sobic002G293300--Sobic001G082900 Sobic002G293300--Sobic004G025000 Sobic001G516100 Sobic001G516100 Sobic002G293300--Sobic001G516100 Sobic004G025000--Sobic001G081600 Sobic004G025000--Sobic002G379400 Sobic006G095600 Sobic006G095600 Sobic004G025000--Sobic006G095600 Sobic004G025000--Sobic002G344700 Sobic004G025000--Sobic002G330300 Sobic001G476400 Sobic001G476400 Sobic004G025000--Sobic001G476400 Sobic001G063600 Sobic001G063600 Sobic004G025000--Sobic001G063600 Sobic001G314700 Sobic001G314700 Sobic004G025000--Sobic001G314700 Sobic010G076700 Sobic010G076700 Sobic004G025000--Sobic010G076700 Sobic004G281200 Sobic004G281200 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic002G021300 Sobic002G021300 Sobic008G059000--Sobic002G021300 Sobic003G087100 Sobic003G087100 Sobic008G059000--Sobic003G087100 Sobic006G194600 Sobic006G194600 Sobic008G059000--Sobic006G194600 Sobic009G167000 Sobic009G167000 Sobic008G059000--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic008G059000--Sobic004G244100 Sobic009G076500 Sobic009G076500 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic001G462800 Sobic001G462800 Sobic001G081600--Sobic001G462800 Sobic002G217100 Sobic002G217100 Sobic001G081600--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic001G081600--Sobic002G344700 Sobic001G081600--Sobic004G025000 Sobic001G081600--Sobic001G476400 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic002G330300--Sobic006G263100 Sobic007G188100 Sobic007G188100 Sobic002G330300--Sobic007G188100 Sobic003G367300--Sobic002G293300 Sobic003G367300--Sobic001G516100 Sobic001G434900 Sobic001G434900 Sobic003G367300--Sobic001G434900 Sobic007G006600 Sobic007G006600 Sobic003G367300--Sobic007G006600 Sobic004G271700 Sobic004G271700 Sobic003G367300--Sobic004G271700 Sobic009G079300 Sobic009G079300 Sobic003G367300--Sobic009G079300 Sobic003G367300--Sobic001G436000 Sobic003G002400 Sobic003G002400 Sobic003G367300--Sobic003G002400 Sobic001G162100 Sobic001G162100 Sobic003G367300--Sobic001G162100 Sobic001G161200 Sobic001G161200 Sobic006G205200--Sobic001G161200 Sobic001G118900 Sobic001G118900 Sobic006G205200--Sobic001G118900 Sobic001G216300 Sobic001G216300 Sobic006G205200--Sobic001G216300 Sobic007G181701 Sobic007G181701 Sobic006G205200--Sobic007G181701 Sobic006G205200--Sobic001G436000 Sobic001G095750 Sobic001G095750 Sobic006G205200--Sobic001G095750 Sobic003G131500 Sobic003G131500 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic006G205200--Sobic001G314700 Sobic002G344700--Sobic004G283300 Sobic002G344700--Sobic001G081600 Sobic002G344700--Sobic001G462800 Sobic006G032200 Sobic006G032200 Sobic002G344700--Sobic006G032200 Sobic002G344700--Sobic004G025000 Sobic009G170100 Sobic009G170100 Sobic002G344700--Sobic009G170100 Sobic002G344700--Sobic004G281200 Sobic002G344700--Sobic006G210300 Sobic002G344700--Sobic002G217100
Octagon: transcription factors


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