Gene annotation
Transcriptome id Sobic.006G205200.1
Synonym Sb06g027640
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YFH2
Pfam -
Panther DB PTHR33181:SF4 PTHR33181
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43150 : -
RAP-DB (Rice) LOC_Os04g51410.1 : expressed protein
MaizeGDB (Corn) Zm00025a009915
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G205200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.001G118900 DUF292 domain containing protein, expressed -
3 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
4 Sobic.007G181701 - -
5 Sobic.001G436000 expressed protein -
6 Sobic.001G095750 - -
7 Sobic.003G131500 VQ domain containing protein, putative, expressed -
8 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
9 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
11 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
12 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
14 Sobic.002G207300 tetraspanin family protein, putative, expressed -
15 Sobic.003G234800 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.003G225900 expressed protein -
18 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
19 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
20 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G205200 Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic006G205200--Sobic001G161200 Sobic001G118900 Sobic001G118900 Sobic006G205200--Sobic001G118900 Sobic001G216300 Sobic001G216300 Sobic006G205200--Sobic001G216300 Sobic007G181701 Sobic007G181701 Sobic006G205200--Sobic007G181701 Sobic001G436000 Sobic001G436000 Sobic006G205200--Sobic001G436000 Sobic001G095750 Sobic001G095750 Sobic006G205200--Sobic001G095750 Sobic003G131500 Sobic003G131500 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic001G314700 Sobic001G314700 Sobic006G205200--Sobic001G314700 Sobic001G161200--Sobic001G118900 Sobic001G161200--Sobic006G205200 Sobic002G207300 Sobic002G207300 Sobic001G161200--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic001G161200--Sobic004G065900 Sobic001G161200--Sobic003G131500 Sobic001G161200--Sobic001G095750 Sobic001G161200--Sobic001G216300 Sobic002G367900 Sobic002G367900 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic004G006500 Sobic004G006500 Sobic001G118900--Sobic004G006500 Sobic002G294600 Sobic002G294600 Sobic001G118900--Sobic002G294600 Sobic002G418900 Sobic002G418900 Sobic001G118900--Sobic002G418900 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic001G216300--Sobic001G314700 Sobic001G216300--Sobic006G205200 Sobic001G216300--Sobic001G161200 Sobic007G196600 Sobic007G196600 Sobic001G216300--Sobic007G196600 Sobic003G352400 Sobic003G352400 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic006G146500 Sobic006G146500 Sobic001G216300--Sobic006G146500 Sobic001G216300--Sobic004G006500 Sobic007G181701--Sobic006G205200 Sobic002G189000 Sobic002G189000 Sobic007G181701--Sobic002G189000 Sobic007G181701--Sobic001G161200 Sobic007G181701--Sobic001G095750 Sobic010G272101 Sobic010G272101 Sobic007G181701--Sobic010G272101 Sobic007G181701--Sobic003G131500 Sobic004G309600 Sobic004G309600 Sobic007G181701--Sobic004G309600 Sobic003G234800 Sobic003G234800 Sobic007G181701--Sobic003G234800 Sobic002G137800 Sobic002G137800 Sobic007G181701--Sobic002G137800 Sobic002G379400 Sobic002G379400 Sobic001G436000--Sobic002G379400 Sobic002G293300 Sobic002G293300 Sobic001G436000--Sobic002G293300 Sobic004G025000 Sobic004G025000 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G081600 Sobic001G081600 Sobic001G436000--Sobic001G081600 Sobic002G330300 Sobic002G330300 Sobic001G436000--Sobic002G330300 Sobic003G367300 Sobic003G367300 Sobic001G436000--Sobic003G367300 Sobic001G436000--Sobic006G205200 Sobic002G344700 Sobic002G344700 Sobic001G436000--Sobic002G344700 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic001G095750--Sobic002G137800 Sobic006G114200 Sobic006G114200 Sobic001G095750--Sobic006G114200 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic003G131500--Sobic001G462800 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic009G128300 Sobic009G128300 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic002G197600 Sobic002G197600 Sobic007G169200--Sobic002G197600 Sobic007G169200--Sobic002G207300 Sobic007G169200--Sobic002G330300 Sobic002G118600 Sobic002G118600 Sobic007G169200--Sobic002G118600 Sobic007G011000 Sobic007G011000 Sobic007G169200--Sobic007G011000 Sobic001G403600 Sobic001G403600 Sobic007G169200--Sobic001G403600 Sobic003G141000 Sobic003G141000 Sobic007G169200--Sobic003G141000 Sobic001G386000 Sobic001G386000 Sobic007G169200--Sobic001G386000 Sobic001G450700 Sobic001G450700 Sobic007G169200--Sobic001G450700 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic001G314700--Sobic004G025000 Sobic001G314700--Sobic001G081600 Sobic001G314700--Sobic006G146500 Sobic001G314700--Sobic001G462800 Sobic003G341100 Sobic003G341100 Sobic001G314700--Sobic003G341100 Sobic001G314700--Sobic002G294600 Sobic001G314700--Sobic003G352400 Sobic001G314700--Sobic002G118600
Octagon: transcription factors


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