Gene annotation
Transcriptome id Sobic.007G181701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RAM7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
3 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.001G095750 - -
5 Sobic.010G272101 - -
6 Sobic.003G131500 VQ domain containing protein, putative, expressed -
7 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
8 Sobic.003G234800 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
10 Sobic.001G118900 DUF292 domain containing protein, expressed -
11 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
12 Sobic.003G225900 expressed protein -
13 Sobic.003G066900 expressed protein -
14 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G233900 - -
16 Sobic.002G344700 remorin, putative, expressed -
17 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.009G128300 CUE domain containing protein, expressed -
19 Sobic.005G087800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic007G181701 Sobic007G181701 Sobic006G205200 Sobic006G205200 Sobic007G181701--Sobic006G205200 Sobic002G189000 Sobic002G189000 Sobic007G181701--Sobic002G189000 Sobic001G161200 Sobic001G161200 Sobic007G181701--Sobic001G161200 Sobic001G095750 Sobic001G095750 Sobic007G181701--Sobic001G095750 Sobic010G272101 Sobic010G272101 Sobic007G181701--Sobic010G272101 Sobic003G131500 Sobic003G131500 Sobic007G181701--Sobic003G131500 Sobic004G309600 Sobic004G309600 Sobic007G181701--Sobic004G309600 Sobic003G234800 Sobic003G234800 Sobic007G181701--Sobic003G234800 Sobic002G137800 Sobic002G137800 Sobic007G181701--Sobic002G137800 Sobic006G205200--Sobic001G161200 Sobic001G118900 Sobic001G118900 Sobic006G205200--Sobic001G118900 Sobic001G216300 Sobic001G216300 Sobic006G205200--Sobic001G216300 Sobic006G205200--Sobic007G181701 Sobic001G436000 Sobic001G436000 Sobic006G205200--Sobic001G436000 Sobic006G205200--Sobic001G095750 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic001G314700 Sobic001G314700 Sobic006G205200--Sobic001G314700 Sobic002G013900 Sobic002G013900 Sobic002G189000--Sobic002G013900 Sobic003G233900 Sobic003G233900 Sobic002G189000--Sobic003G233900 Sobic002G271100 Sobic002G271100 Sobic002G189000--Sobic002G271100 Sobic010G260300 Sobic010G260300 Sobic002G189000--Sobic010G260300 Sobic009G128300 Sobic009G128300 Sobic002G189000--Sobic009G128300 Sobic002G110200 Sobic002G110200 Sobic002G189000--Sobic002G110200 Sobic003G225900 Sobic003G225900 Sobic002G189000--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic002G189000--Sobic004G155150 Sobic004G285100 Sobic004G285100 Sobic002G189000--Sobic004G285100 Sobic001G161200--Sobic001G118900 Sobic001G161200--Sobic006G205200 Sobic002G207300 Sobic002G207300 Sobic001G161200--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic001G161200--Sobic004G065900 Sobic001G161200--Sobic003G131500 Sobic001G161200--Sobic001G095750 Sobic001G161200--Sobic001G216300 Sobic002G367900 Sobic002G367900 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic001G095750--Sobic002G137800 Sobic006G114200 Sobic006G114200 Sobic001G095750--Sobic006G114200 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic001G081600 Sobic001G081600 Sobic010G272101--Sobic001G081600 Sobic010G272101--Sobic003G131500 Sobic002G217100 Sobic002G217100 Sobic010G272101--Sobic002G217100 Sobic002G068800 Sobic002G068800 Sobic010G272101--Sobic002G068800 Sobic001G063600 Sobic001G063600 Sobic010G272101--Sobic001G063600 Sobic006G032200 Sobic006G032200 Sobic010G272101--Sobic006G032200 Sobic001G050800 Sobic001G050800 Sobic010G272101--Sobic001G050800 Sobic010G016500 Sobic010G016500 Sobic010G272101--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic010G272101--Sobic004G244300 Sobic001G462800 Sobic001G462800 Sobic003G131500--Sobic001G462800 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic003G131500--Sobic010G016500 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic003G131500--Sobic009G128300 Sobic003G131500--Sobic004G244300 Sobic003G087100 Sobic003G087100 Sobic004G309600--Sobic003G087100 Sobic004G309600--Sobic002G110200 Sobic003G272400 Sobic003G272400 Sobic004G309600--Sobic003G272400 Sobic004G300300 Sobic004G300300 Sobic004G309600--Sobic004G300300 Sobic008G059000 Sobic008G059000 Sobic004G309600--Sobic008G059000 Sobic004G309600--Sobic006G203000 Sobic006G163900 Sobic006G163900 Sobic004G309600--Sobic006G163900 Sobic003G422200 Sobic003G422200 Sobic004G309600--Sobic003G422200 Sobic002G037400 Sobic002G037400 Sobic004G309600--Sobic002G037400 Sobic003G234800--Sobic002G189000 Sobic003G234800--Sobic006G203000 Sobic003G234800--Sobic002G182800 Sobic003G234800--Sobic009G128300 Sobic003G227600 Sobic003G227600 Sobic003G234800--Sobic003G227600 Sobic010G085400 Sobic010G085400 Sobic003G234800--Sobic010G085400 Sobic003G234800--Sobic002G110200 Sobic002G331450 Sobic002G331450 Sobic003G234800--Sobic002G331450 Sobic003G234800--Sobic002G013900 Sobic002G137800--Sobic001G095750 Sobic002G137800--Sobic001G118900 Sobic004G340800 Sobic004G340800 Sobic002G137800--Sobic004G340800 Sobic001G351100 Sobic001G351100 Sobic002G137800--Sobic001G351100 Sobic002G137800--Sobic006G205200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic003G138400 Sobic003G138400 Sobic002G137800--Sobic003G138400 Sobic009G028500 Sobic009G028500 Sobic002G137800--Sobic009G028500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.