Gene annotation
Transcriptome id Sobic.001G161200.2,Sobic.001G161200.1
Synonym SnRK3.3, SbCIPK04, Sb01g014090,CBL-interacting protein kinases, CIPK4
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1B6QJ89 , C4P7R8
Pfam PF14531 PF03822
Panther DB PTHR24343 PTHR24343:SF159
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT4G14580 : CBL-interacting protein kinase 4
RAP-DB (Rice) LOC_Os03g43440.1 : CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a007346 , Zm00025a025296
Brachypodium KQJ85956 , KQK14076
Barley HORVU5Hr1G014200.1 , HORVU5Hr1G093660.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G161200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G118900 DUF292 domain containing protein, expressed -
2 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G207300 tetraspanin family protein, putative, expressed -
4 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
5 Sobic.003G131500 VQ domain containing protein, putative, expressed -
6 Sobic.001G095750 - -
7 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
8 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.001G041500 basic helix-loop-helix, putative, expressed -
10 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
11 Sobic.004G006500 expressed protein -
12 Sobic.007G181701 - -
13 Sobic.002G185200 VQ domain containing protein, putative, expressed -
14 Sobic.002G418900 expressed protein -
15 Sobic.002G401600 glycosyltransferase, putative, expressed -
16 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
17 Sobic.001G436000 expressed protein -
18 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
19 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
20 Sobic.009G028500 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic001G161200 Sobic001G161200 Sobic001G118900 Sobic001G118900 Sobic001G161200--Sobic001G118900 Sobic006G205200 Sobic006G205200 Sobic001G161200--Sobic006G205200 Sobic002G207300 Sobic002G207300 Sobic001G161200--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic001G161200--Sobic004G065900 Sobic003G131500 Sobic003G131500 Sobic001G161200--Sobic003G131500 Sobic001G095750 Sobic001G095750 Sobic001G161200--Sobic001G095750 Sobic001G216300 Sobic001G216300 Sobic001G161200--Sobic001G216300 Sobic002G367900 Sobic002G367900 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic004G006500 Sobic004G006500 Sobic001G118900--Sobic004G006500 Sobic002G294600 Sobic002G294600 Sobic001G118900--Sobic002G294600 Sobic002G418900 Sobic002G418900 Sobic001G118900--Sobic002G418900 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic006G205200--Sobic001G161200 Sobic006G205200--Sobic001G118900 Sobic006G205200--Sobic001G216300 Sobic007G181701 Sobic007G181701 Sobic006G205200--Sobic007G181701 Sobic001G436000 Sobic001G436000 Sobic006G205200--Sobic001G436000 Sobic006G205200--Sobic001G095750 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic001G314700 Sobic001G314700 Sobic006G205200--Sobic001G314700 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic007G201100 Sobic007G201100 Sobic002G207300--Sobic007G201100 Sobic006G146500 Sobic006G146500 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic003G425200 Sobic003G425200 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic001G410100 Sobic001G410100 Sobic002G207300--Sobic001G410100 Sobic001G095700 Sobic001G095700 Sobic002G207300--Sobic001G095700 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic009G010400 Sobic009G010400 Sobic004G065900--Sobic009G010400 Sobic003G131500--Sobic001G462800 Sobic010G272101 Sobic010G272101 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic009G128300 Sobic009G128300 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic006G114200 Sobic006G114200 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic001G216300--Sobic001G314700 Sobic001G216300--Sobic006G205200 Sobic001G216300--Sobic001G161200 Sobic007G196600 Sobic007G196600 Sobic001G216300--Sobic007G196600 Sobic003G352400 Sobic003G352400 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic001G216300--Sobic006G146500 Sobic001G216300--Sobic004G006500 Sobic002G367900--Sobic002G207300 Sobic002G367900--Sobic004G065900 Sobic003G268900 Sobic003G268900 Sobic002G367900--Sobic003G268900 Sobic002G367900--Sobic001G095700 Sobic002G367900--Sobic001G462800 Sobic002G367900--Sobic002G294600 Sobic002G197600 Sobic002G197600 Sobic002G367900--Sobic002G197600 Sobic006G210300 Sobic006G210300 Sobic002G367900--Sobic006G210300 Sobic004G244100 Sobic004G244100 Sobic002G367900--Sobic004G244100 Sobic002G023900 Sobic002G023900 Sobic001G041500--Sobic002G023900 Sobic001G041500--Sobic004G244100 Sobic006G026400 Sobic006G026400 Sobic001G041500--Sobic006G026400 Sobic004G176900 Sobic004G176900 Sobic001G041500--Sobic004G176900 Sobic001G041500--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic001G041500--Sobic002G037400 Sobic008G059000 Sobic008G059000 Sobic001G041500--Sobic008G059000 Sobic009G076700 Sobic009G076700 Sobic001G041500--Sobic009G076700 Sobic009G076500 Sobic009G076500 Sobic001G041500--Sobic009G076500
Octagon: transcription factors


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