Gene annotation
Transcriptome id Sobic.001G216300.1
Synonym Sb01g019050
Functional annotation glutaredoxin domain containing protein, putative, expressed
UniProt C5WYC4
Pfam PF00462 PF00610 PF04784
Panther DB PTHR23054 PTHR23054:SF14
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT3G11920 : glutaredoxin-related
RAP-DB (Rice) LOC_Os10g34170.1 : glutaredoxin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006568
Brachypodium PNT67570 , KQJ97149
Barley HORVU1Hr1G042250.10 , HORVU1Hr1G042250.8 , HORVU1Hr1G042250.9 , HORVU1Hr1G042250.2 , HORVU1Hr1G042250.3 , HORVU1Hr1G042250.4 , HORVU1Hr1G042250.5 , HORVU1Hr1G042250.6 , HORVU1Hr1G042250.7
Wheat TraesCS1A02G159200 , TraesCS1D02G156600 , TraesCS1B02G175600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
2 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
5 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
6 Sobic.002G185200 VQ domain containing protein, putative, expressed -
7 Sobic.003G337800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY108, expressed -
8 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
9 Sobic.004G006500 expressed protein -
10 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.007G145700 expressed protein -
12 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.001G118900 DUF292 domain containing protein, expressed -
14 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
15 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.003G425200 Calmodulin-like protein 1(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
17 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
18 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
19 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G216300 Sobic001G216300 Sobic001G314700 Sobic001G314700 Sobic001G216300--Sobic001G314700 Sobic006G205200 Sobic006G205200 Sobic001G216300--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic001G216300--Sobic001G161200 Sobic007G196600 Sobic007G196600 Sobic001G216300--Sobic007G196600 Sobic003G352400 Sobic003G352400 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic006G146500 Sobic006G146500 Sobic001G216300--Sobic006G146500 Sobic004G006500 Sobic004G006500 Sobic001G216300--Sobic004G006500 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic003G341100 Sobic003G341100 Sobic001G314700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G314700--Sobic002G294600 Sobic001G314700--Sobic003G352400 Sobic002G118600 Sobic002G118600 Sobic001G314700--Sobic002G118600 Sobic006G205200--Sobic001G161200 Sobic001G118900 Sobic001G118900 Sobic006G205200--Sobic001G118900 Sobic006G205200--Sobic001G216300 Sobic007G181701 Sobic007G181701 Sobic006G205200--Sobic007G181701 Sobic001G436000 Sobic001G436000 Sobic006G205200--Sobic001G436000 Sobic001G095750 Sobic001G095750 Sobic006G205200--Sobic001G095750 Sobic003G131500 Sobic003G131500 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic006G205200--Sobic001G314700 Sobic001G161200--Sobic001G118900 Sobic001G161200--Sobic006G205200 Sobic002G207300 Sobic002G207300 Sobic001G161200--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic001G161200--Sobic004G065900 Sobic001G161200--Sobic003G131500 Sobic001G161200--Sobic001G095750 Sobic001G161200--Sobic001G216300 Sobic002G367900 Sobic002G367900 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic007G196600--Sobic002G118600 Sobic001G343900 Sobic001G343900 Sobic007G196600--Sobic001G343900 Sobic007G196600--Sobic003G352400 Sobic007G044300 Sobic007G044300 Sobic007G196600--Sobic007G044300 Sobic006G044932 Sobic006G044932 Sobic007G196600--Sobic006G044932 Sobic007G196600--Sobic001G314700 Sobic001G410100 Sobic001G410100 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic002G222800 Sobic002G222800 Sobic007G196600--Sobic002G222800 Sobic003G352400--Sobic003G341100 Sobic003G352400--Sobic002G118600 Sobic010G083600 Sobic010G083600 Sobic003G352400--Sobic010G083600 Sobic007G090300 Sobic007G090300 Sobic003G352400--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic003G352400--Sobic005G109000 Sobic010G102000 Sobic010G102000 Sobic003G352400--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G352400--Sobic001G341600 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic002G185200--Sobic004G006500 Sobic002G418900 Sobic002G418900 Sobic002G185200--Sobic002G418900 Sobic002G185200--Sobic002G294600 Sobic002G185200--Sobic004G065900 Sobic002G185200--Sobic001G118900 Sobic002G185200--Sobic006G146500 Sobic007G143400 Sobic007G143400 Sobic002G185200--Sobic007G143400 Sobic006G114200 Sobic006G114200 Sobic002G185200--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic002G185200--Sobic004G086800 Sobic001G051600 Sobic001G051600 Sobic003G337800--Sobic001G051600 Sobic003G337800--Sobic001G216300 Sobic010G052600 Sobic010G052600 Sobic003G337800--Sobic010G052600 Sobic001G489600 Sobic001G489600 Sobic003G337800--Sobic001G489600 Sobic003G337800--Sobic002G185200 Sobic003G225900 Sobic003G225900 Sobic003G337800--Sobic003G225900 Sobic003G337800--Sobic003G352400 Sobic002G427400 Sobic002G427400 Sobic003G337800--Sobic002G427400 Sobic006G095600 Sobic006G095600 Sobic003G337800--Sobic006G095600 Sobic003G425200 Sobic003G425200 Sobic006G146500--Sobic003G425200 Sobic006G146500--Sobic004G065900 Sobic006G146500--Sobic007G145700 Sobic006G146500--Sobic003G341100 Sobic006G146500--Sobic002G207300 Sobic006G146500--Sobic002G294600 Sobic007G201100 Sobic007G201100 Sobic006G146500--Sobic007G201100 Sobic006G146500--Sobic002G367900 Sobic006G146500--Sobic001G081600 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G006500--Sobic004G086800
Octagon: transcription factors


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