Gene annotation
Transcriptome id Sobic.006G265000.1,Sobic.006G265000.2
Synonym AAE5, Sb06g032750
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
AMP-binding enzyme, putative, expressed
UniProt C5YAG8
Pfam PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G16370 : acyl activating enzyme 5
RAP-DB (Rice) LOC_Os04g57850.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a009318 , Zm00025a042696 , Zm00025a053468 , Zm00025a000419
Brachypodium KQJ85265
Barley HORVU2Hr1G120190.4 , HORVU2Hr1G120190.3 , HORVU2Hr1G120190.2 , HORVU2Hr1G120190.1 , HORVU2Hr1G120150.9 , HORVU2Hr1G120150.8 , HORVU2Hr1G120150.3 , HORVU2Hr1G120150.2 , HORVU2Hr1G120150.1 , HORVU2Hr1G120150.7 , HORVU2Hr1G120150.6 , HORVU2Hr1G120150.5 , HORVU2Hr1G120150.4 , HORVU4Hr1G082470.1 , HORVU4Hr1G082470.2 , HORVU2Hr1G125420.1
Wheat TraesCSU02G121800 , TraesCS2D02G556500 , TraesCS2D02G557900 , TraesCS2A02G557100 , TraesCS2A02G556900 , TraesCS2D02G556600 , TraesCS2B02G587100 , TraesCS5D02G314500 , TraesCS2D02G556000 , TraesCS2D02G556100 , TraesCS5A02G307500 , TraesCSU02G037900 , TraesCS2B02G586300
Populus -


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cDNA sequences
Sobic.006G265000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
3 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
6 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
7 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
8 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
9 Sobic.003G262100 expressed protein -
10 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
11 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
12 Sobic.001G128100 expressed protein -
13 Sobic.008G181300 expressed protein -
14 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
15 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.008G188000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
17 Sobic.006G044932 - -
18 Sobic.003G296300 WRKY13, expressed -
19 Sobic.009G038000 expressed protein -
20 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G265000 Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic006G265000--Sobic001G314800 Sobic006G014700 Sobic006G014700 Sobic006G265000--Sobic006G014700 Sobic010G214200 Sobic010G214200 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic003G310500 Sobic003G310500 Sobic006G265000--Sobic003G310500 Sobic007G196600 Sobic007G196600 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic001G314800--Sobic006G014700 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic006G014700--Sobic001G314800 Sobic002G216500 Sobic002G216500 Sobic006G014700--Sobic002G216500 Sobic006G014700--Sobic002G160600 Sobic006G014700--Sobic003G310500 Sobic006G014700--Sobic006G265000 Sobic009G216050 Sobic009G216050 Sobic006G014700--Sobic009G216050 Sobic006G014700--Sobic010G214200 Sobic006G014700--Sobic002G407200 Sobic006G014700--Sobic008G018600 Sobic006G045000 Sobic006G045000 Sobic010G214200--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic010G214200--Sobic004G209500 Sobic004G217700 Sobic004G217700 Sobic010G214200--Sobic004G217700 Sobic001G056500 Sobic001G056500 Sobic010G214200--Sobic001G056500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic002G423600 Sobic002G423600 Sobic010G214200--Sobic002G423600 Sobic010G214200--Sobic003G310500 SobicK044407 SobicK044407 Sobic010G214200--SobicK044407 Sobic001G345400 Sobic001G345400 Sobic004G101000--Sobic001G345400 Sobic004G101000--Sobic009G216050 Sobic004G101000--Sobic003G296300 Sobic009G038000 Sobic009G038000 Sobic004G101000--Sobic009G038000 Sobic004G101000--Sobic002G407200 Sobic004G101000--Sobic010G214200 Sobic004G101000--Sobic001G314800 Sobic004G101000--Sobic001G195100 Sobic004G101000--Sobic003G310500 Sobic007G064800 Sobic007G064800 Sobic002G160600--Sobic007G064800 Sobic002G160600--Sobic006G014700 Sobic005G218500 Sobic005G218500 Sobic002G160600--Sobic005G218500 Sobic002G160600--Sobic002G216500 Sobic002G160600--Sobic001G314800 Sobic008G075400 Sobic008G075400 Sobic002G160600--Sobic008G075400 Sobic002G160600--Sobic004G140000 Sobic002G160600--Sobic006G265000 Sobic007G183100 Sobic007G183100 Sobic002G160600--Sobic007G183100 Sobic003G310500--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 Sobic002G118600 Sobic002G118600 Sobic007G196600--Sobic002G118600 Sobic001G343900 Sobic001G343900 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G044300 Sobic007G044300 Sobic007G196600--Sobic007G044300 Sobic006G044932 Sobic006G044932 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic001G410100 Sobic001G410100 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic002G222800 Sobic002G222800 Sobic007G196600--Sobic002G222800 Sobic004G140000--Sobic009G038000 Sobic004G140000--Sobic002G216500 Sobic004G140000--Sobic002G160600 Sobic004G140000--Sobic008G038100 Sobic004G140000--Sobic001G314800 Sobic004G140000--Sobic003G310500 Sobic004G140000--Sobic010G214200 Sobic004G140000--Sobic006G265000 Sobic004G140000--Sobic004G101000 Sobic003G262100--Sobic001G314800 Sobic009G192100 Sobic009G192100 Sobic003G262100--Sobic009G192100 Sobic001G530350 Sobic001G530350 Sobic003G262100--Sobic001G530350 Sobic003G262100--Sobic006G265000 Sobic004G095600 Sobic004G095600 Sobic003G262100--Sobic004G095600 Sobic003G262100--Sobic008G181300 Sobic003G262100--Sobic003G296300 Sobic002G138700 Sobic002G138700 Sobic003G262100--Sobic002G138700 Sobic003G262100--Sobic001G345400
Octagon: transcription factors


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