Gene annotation
Transcriptome id Sobic.001G343900.1
Synonym JAZ1, Sb01g033020, TIFY10A, JAZ
Functional annotation tran- scriptional repressor JASMONATE ZIM-DOMAIN (PubMedID : 25711704)
ZIM domain containing protein, putative, expressed
UniProt C5WXI6
Pfam PF09425 PF06200
Panther DB PTHR33077 PTHR33077:SF9
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19180 : jasmonate-zim-domain protein 1
RAP-DB (Rice) LOC_Os03g28940.1 : ZIM domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002784
Brachypodium KQK15259 , KQK15258
Barley HORVU2Hr1G031310.10 , HORVU2Hr1G031310.1 , HORVU2Hr1G031310.2 , HORVU2Hr1G031310.3 , HORVU2Hr1G031310.4 , HORVU2Hr1G031310.5 , HORVU2Hr1G031310.6 , HORVU2Hr1G031310.7 , HORVU2Hr1G031310.8 , HORVU2Hr1G031310.9
Wheat TraesCS2B02G195600 , TraesCS2A02G169300 , TraesCS2D02G176800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G044932 - -
2 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
3 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
4 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
6 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
7 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.007G195701 - -
9 Sobic.002G222800 galactosyltransferase, putative, expressed -
10 Sobic.001G162100 WRKY94, expressed -
11 Sobic.009G046600 stress-related protein, putative, expressed -
12 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
13 Sobic.004G352900 expressed protein -
14 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
15 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
16 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
17 Sobic.001G285000 - -
18 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
19 Sobic.002G057600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -


Gene co-expression network
sample Sobic001G343900 Sobic001G343900 Sobic006G044932 Sobic006G044932 Sobic001G343900--Sobic006G044932 Sobic002G407700 Sobic002G407700 Sobic001G343900--Sobic002G407700 Sobic007G196600 Sobic007G196600 Sobic001G343900--Sobic007G196600 Sobic007G044300 Sobic007G044300 Sobic001G343900--Sobic007G044300 Sobic005G228000 Sobic005G228000 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G410100 Sobic001G410100 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic003G277500 Sobic003G277500 Sobic006G044932--Sobic003G277500 Sobic006G044932--Sobic001G343900 Sobic006G044932--Sobic002G407700 Sobic004G010300 Sobic004G010300 Sobic006G044932--Sobic004G010300 Sobic006G044932--Sobic005G228000 Sobic002G373001 Sobic002G373001 Sobic006G044932--Sobic002G373001 Sobic006G044932--Sobic007G196600 Sobic006G138500 Sobic006G138500 Sobic006G044932--Sobic006G138500 Sobic002G333300 Sobic002G333300 Sobic006G044932--Sobic002G333300 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic004G195000 Sobic004G195000 Sobic002G407700--Sobic004G195000 Sobic009G232266 Sobic009G232266 Sobic002G407700--Sobic009G232266 Sobic003G296300 Sobic003G296300 Sobic002G407700--Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic002G407700--Sobic001G345400 Sobic002G407700--Sobic005G228000 Sobic002G118600 Sobic002G118600 Sobic007G196600--Sobic002G118600 Sobic007G196600--Sobic001G343900 Sobic003G352400 Sobic003G352400 Sobic007G196600--Sobic003G352400 Sobic007G196600--Sobic007G044300 Sobic007G196600--Sobic006G044932 Sobic001G314700 Sobic001G314700 Sobic007G196600--Sobic001G314700 Sobic007G196600--Sobic001G410100 Sobic009G046600 Sobic009G046600 Sobic007G196600--Sobic009G046600 Sobic007G196600--Sobic002G222800 Sobic007G044300--Sobic001G343900 Sobic007G044300--Sobic007G196600 Sobic003G369500 Sobic003G369500 Sobic007G044300--Sobic003G369500 Sobic007G006600 Sobic007G006600 Sobic007G044300--Sobic007G006600 Sobic001G162100 Sobic001G162100 Sobic007G044300--Sobic001G162100 Sobic007G044300--Sobic001G410100 Sobic006G265000 Sobic006G265000 Sobic007G044300--Sobic006G265000 Sobic001G216300 Sobic001G216300 Sobic007G044300--Sobic001G216300 Sobic002G333600 Sobic002G333600 Sobic007G044300--Sobic002G333600 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic002G070200 Sobic002G070200 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic001G536500 Sobic001G536500 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic002G207300 Sobic002G207300 Sobic001G410100--Sobic002G207300 Sobic003G341100 Sobic003G341100 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic009G100500 Sobic009G100500 Sobic001G410100--Sobic009G100500 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic004G065900 Sobic004G065900 Sobic001G410100--Sobic004G065900 Sobic002G078400 Sobic002G078400 Sobic007G195701--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic007G195701--Sobic006G182100 Sobic001G283500 Sobic001G283500 Sobic007G195701--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic007G195701--Sobic002G214900 Sobic006G010600 Sobic006G010600 Sobic007G195701--Sobic006G010600 Sobic001G309500 Sobic001G309500 Sobic007G195701--Sobic001G309500 Sobic001G445800 Sobic001G445800 Sobic007G195701--Sobic001G445800 Sobic003G220600 Sobic003G220600 Sobic007G195701--Sobic003G220600 Sobic007G195701--Sobic002G333600 Sobic009G155200 Sobic009G155200 Sobic002G222800--Sobic009G155200 Sobic006G192500 Sobic006G192500 Sobic002G222800--Sobic006G192500 Sobic001G157200 Sobic001G157200 Sobic002G222800--Sobic001G157200 Sobic002G379866 Sobic002G379866 Sobic002G222800--Sobic002G379866 Sobic008G059200 Sobic008G059200 Sobic002G222800--Sobic008G059200 Sobic006G078400 Sobic006G078400 Sobic002G222800--Sobic006G078400 Sobic010G107100 Sobic010G107100 Sobic002G222800--Sobic010G107100 Sobic002G222800--Sobic001G399100 Sobic004G158901 Sobic004G158901 Sobic002G222800--Sobic004G158901
Octagon: transcription factors


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