Gene annotation
Transcriptome id Sobic.003G262100.1
Synonym Sb03g031600
Functional annotation expressed protein
UniProt C5XGV0
Pfam PF07797
Panther DB PTHR33130 PTHR33130:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25370 : Protein of unknown function (DUF1639)
RAP-DB (Rice) LOC_Os01g49440.1 : expressed protein
MaizeGDB (Corn) Zm00025a044470 , Zm00025a038852 , Zm00025a036530 , Zm00025a027975
Brachypodium -
Barley HORVU3Hr1G064070.5 , HORVU3Hr1G064070.2 , HORVU3Hr1G064070.3 , HORVU3Hr1G064070.1 , HORVU3Hr1G064070.6
Wheat TraesCS3D02G262700 , TraesCS3B02G296200 , TraesCS3A02G262800
Populus -


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cDNA sequences
Sobic.003G262100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
3 Sobic.001G530350 - -
4 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
5 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
6 Sobic.008G181300 expressed protein -
7 Sobic.003G296300 WRKY13, expressed -
8 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
9 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
10 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.001G285000 - -
12 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
14 Sobic.002G373001 - -
15 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
16 Sobic.001G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.003G358400 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K09591: steroid 5-alpha-reductase
19 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
20 Sobic.009G038000 expressed protein -


Gene co-expression network
sample Sobic003G262100 Sobic003G262100 Sobic001G314800 Sobic001G314800 Sobic003G262100--Sobic001G314800 Sobic009G192100 Sobic009G192100 Sobic003G262100--Sobic009G192100 Sobic001G530350 Sobic001G530350 Sobic003G262100--Sobic001G530350 Sobic006G265000 Sobic006G265000 Sobic003G262100--Sobic006G265000 Sobic004G095600 Sobic004G095600 Sobic003G262100--Sobic004G095600 Sobic008G181300 Sobic008G181300 Sobic003G262100--Sobic008G181300 Sobic003G296300 Sobic003G296300 Sobic003G262100--Sobic003G296300 Sobic002G138700 Sobic002G138700 Sobic003G262100--Sobic002G138700 Sobic001G345400 Sobic001G345400 Sobic003G262100--Sobic001G345400 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic001G314800--Sobic003G296300 Sobic003G310500 Sobic003G310500 Sobic001G314800--Sobic003G310500 Sobic001G314800--Sobic008G181300 Sobic009G192100--Sobic008G181300 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic008G038100 Sobic008G038100 Sobic009G192100--Sobic008G038100 Sobic009G192100--Sobic001G345400 Sobic001G056500 Sobic001G056500 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G526900 Sobic001G526900 Sobic001G530350--Sobic001G526900 Sobic001G530350--Sobic003G296300 Sobic001G093900 Sobic001G093900 Sobic001G530350--Sobic001G093900 Sobic001G530350--Sobic001G345400 Sobic009G100800 Sobic009G100800 Sobic001G530350--Sobic009G100800 Sobic001G225600 Sobic001G225600 Sobic001G530350--Sobic001G225600 Sobic003G013600 Sobic003G013600 Sobic001G530350--Sobic003G013600 Sobic006G246100 Sobic006G246100 Sobic001G530350--Sobic006G246100 Sobic006G265000--Sobic001G314800 Sobic006G265000--Sobic006G014700 Sobic010G214200 Sobic010G214200 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic006G265000--Sobic003G310500 Sobic007G196600 Sobic007G196600 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic006G265000--Sobic003G262100 Sobic002G373001 Sobic002G373001 Sobic004G095600--Sobic002G373001 Sobic001G226800 Sobic001G226800 Sobic004G095600--Sobic001G226800 Sobic006G131600 Sobic006G131600 Sobic004G095600--Sobic006G131600 Sobic002G034500 Sobic002G034500 Sobic004G095600--Sobic002G034500 Sobic003G102200 Sobic003G102200 Sobic004G095600--Sobic003G102200 Sobic002G092801 Sobic002G092801 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic007G165701 Sobic007G165701 Sobic004G095600--Sobic007G165701 Sobic004G095600--Sobic003G262100 Sobic008G181300--Sobic009G192100 Sobic008G181300--Sobic003G310500 Sobic009G233900 Sobic009G233900 Sobic008G181300--Sobic009G233900 Sobic008G181300--Sobic008G038100 Sobic008G181300--Sobic008G018600 Sobic008G181300--Sobic001G314800 Sobic008G181300--Sobic002G407200 Sobic009G216050 Sobic009G216050 Sobic008G181300--Sobic009G216050 Sobic004G209500 Sobic004G209500 Sobic008G181300--Sobic004G209500 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic006G259000 Sobic006G259000 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic007G090300 Sobic007G090300 Sobic002G138700--Sobic007G090300 Sobic004G086800 Sobic004G086800 Sobic002G138700--Sobic004G086800 Sobic010G102000 Sobic010G102000 Sobic002G138700--Sobic010G102000 Sobic002G138700--Sobic001G195100 Sobic003G416500 Sobic003G416500 Sobic002G138700--Sobic003G416500 Sobic009G010400 Sobic009G010400 Sobic002G138700--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic002G138700--Sobic001G287600 Sobic001G345400--Sobic003G296300 Sobic001G345400--Sobic004G101000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G345400--Sobic001G530350 Sobic001G345400--Sobic009G192100 Sobic001G345400--Sobic008G038100
Octagon: transcription factors


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