Gene annotation
Transcriptome id Sobic.004G095600.1
Synonym Sb04g007890
Functional annotation NBS-LRR type disease resistance protein, putative, expressed
UniProt C5XYF5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF558
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46710 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os02g19750.1 : NBS-LRR type disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT62663
Barley -
Wheat TraesCS2A02G590100 , TraesCS6B02G466800 , TraesCS3A02G007400 , TraesCSU02G157800 , TraesCS2B02G593900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G373001 - -
2 Sobic.001G226800 zinc finger family protein, putative, expressed -
3 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.002G034500 ERD4 protein, putative, expressed -
5 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.002G092801 - -
7 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
8 Sobic.007G165701 - -
9 Sobic.003G262100 expressed protein -
10 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
11 Sobic.002G403300 expressed protein -
12 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
13 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
14 Sobic.001G187600 cytochrome P450, putative, expressed K12153: phenylalanine N-monooxygenase
15 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
16 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
17 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
18 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
19 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
20 Sobic.001G530350 - -


Gene co-expression network
sample Sobic004G095600 Sobic004G095600 Sobic002G373001 Sobic002G373001 Sobic004G095600--Sobic002G373001 Sobic001G226800 Sobic001G226800 Sobic004G095600--Sobic001G226800 Sobic006G131600 Sobic006G131600 Sobic004G095600--Sobic006G131600 Sobic002G034500 Sobic002G034500 Sobic004G095600--Sobic002G034500 Sobic003G102200 Sobic003G102200 Sobic004G095600--Sobic003G102200 Sobic002G092801 Sobic002G092801 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic007G165701 Sobic007G165701 Sobic004G095600--Sobic007G165701 Sobic003G262100 Sobic003G262100 Sobic004G095600--Sobic003G262100 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic002G373001--Sobic004G095600 Sobic001G226800--Sobic004G095600 Sobic001G226800--Sobic006G131600 Sobic001G226800--Sobic002G373001 Sobic001G226800--Sobic004G302200 Sobic003G110200 Sobic003G110200 Sobic001G226800--Sobic003G110200 Sobic001G226800--Sobic003G102200 Sobic001G226800--Sobic001G449700 Sobic001G226800--Sobic002G092801 Sobic001G226800--Sobic002G034500 Sobic006G131600--Sobic004G095600 Sobic006G131600--Sobic002G373001 Sobic010G267600 Sobic010G267600 Sobic006G131600--Sobic010G267600 Sobic006G131600--Sobic002G092801 Sobic006G131600--Sobic003G110200 Sobic006G131600--Sobic001G226800 Sobic003G082600 Sobic003G082600 Sobic006G131600--Sobic003G082600 Sobic003G202200 Sobic003G202200 Sobic006G131600--Sobic003G202200 Sobic006G131600--Sobic002G034500 Sobic002G034500--Sobic003G021500 Sobic002G034500--Sobic002G373001 Sobic002G034500--Sobic002G082600 Sobic005G228000 Sobic005G228000 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic001G019900 Sobic001G019900 Sobic002G034500--Sobic001G019900 Sobic002G034500--Sobic001G449700 Sobic002G034500--Sobic002G092801 Sobic002G312400 Sobic002G312400 Sobic002G034500--Sobic002G312400 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic001G259700 Sobic001G259700 Sobic003G102200--Sobic001G259700 Sobic001G383700 Sobic001G383700 Sobic003G102200--Sobic001G383700 Sobic007G149300 Sobic007G149300 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic002G092801--Sobic003G110200 Sobic002G092801--Sobic001G449700 Sobic002G092801--Sobic003G102200 Sobic002G092801--Sobic003G021500 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic002G092801--Sobic003G202200 Sobic002G092801--Sobic002G034500 Sobic002G092801--Sobic007G149300 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic010G268400 Sobic010G268400 Sobic004G302200--Sobic010G268400 Sobic001G432700 Sobic001G432700 Sobic004G302200--Sobic001G432700 Sobic003G135700 Sobic003G135700 Sobic004G302200--Sobic003G135700 Sobic002G407100 Sobic002G407100 Sobic004G302200--Sobic002G407100 Sobic004G302200--Sobic002G319500 Sobic004G302200--Sobic002G373001 Sobic009G065300 Sobic009G065300 Sobic004G302200--Sobic009G065300 Sobic007G165701--Sobic004G095600 Sobic003G050350 Sobic003G050350 Sobic007G165701--Sobic003G050350 Sobic008G025300 Sobic008G025300 Sobic007G165701--Sobic008G025300 Sobic009G192100 Sobic009G192100 Sobic007G165701--Sobic009G192100 Sobic009G014600 Sobic009G014600 Sobic007G165701--Sobic009G014600 Sobic008G038100 Sobic008G038100 Sobic007G165701--Sobic008G038100 Sobic008G127800 Sobic008G127800 Sobic007G165701--Sobic008G127800 Sobic007G165701--Sobic006G131600 Sobic001G056500 Sobic001G056500 Sobic007G165701--Sobic001G056500 Sobic001G314800 Sobic001G314800 Sobic003G262100--Sobic001G314800 Sobic003G262100--Sobic009G192100 Sobic001G530350 Sobic001G530350 Sobic003G262100--Sobic001G530350 Sobic006G265000 Sobic006G265000 Sobic003G262100--Sobic006G265000 Sobic003G262100--Sobic004G095600 Sobic008G181300 Sobic008G181300 Sobic003G262100--Sobic008G181300 Sobic003G296300 Sobic003G296300 Sobic003G262100--Sobic003G296300 Sobic002G138700 Sobic002G138700 Sobic003G262100--Sobic002G138700 Sobic001G345400 Sobic001G345400 Sobic003G262100--Sobic001G345400
Octagon: transcription factors


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