Gene annotation
Transcriptome id Sobic.007G165701.1
Synonym -
Functional annotation -
UniProt C5YH53
Pfam PF00168
Panther DB PTHR32246 PTHR32246:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G23950 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os08g44850.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005556 , Zm00025a046048 , Zm00025a013483
Brachypodium KQJ94675
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
2 Sobic.003G050350 - -
3 Sobic.008G025300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@DUF567 domain containing protein, putative, expressed -
4 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
5 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
6 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.008G127800 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
10 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
11 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
12 Sobic.002G224300 no apical meristem protein, putative, expressed -
13 Sobic.003G086200 expressed protein -
14 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
15 Sobic.001G494600 expressed protein -
16 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
17 Sobic.006G078500 abscisic stress-ripening, putative, expressed -
18 Sobic.002G092500 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
20 Sobic.003G262100 expressed protein -


Gene co-expression network
sample Sobic007G165701 Sobic007G165701 Sobic004G095600 Sobic004G095600 Sobic007G165701--Sobic004G095600 Sobic003G050350 Sobic003G050350 Sobic007G165701--Sobic003G050350 Sobic008G025300 Sobic008G025300 Sobic007G165701--Sobic008G025300 Sobic009G192100 Sobic009G192100 Sobic007G165701--Sobic009G192100 Sobic009G014600 Sobic009G014600 Sobic007G165701--Sobic009G014600 Sobic008G038100 Sobic008G038100 Sobic007G165701--Sobic008G038100 Sobic008G127800 Sobic008G127800 Sobic007G165701--Sobic008G127800 Sobic006G131600 Sobic006G131600 Sobic007G165701--Sobic006G131600 Sobic001G056500 Sobic001G056500 Sobic007G165701--Sobic001G056500 Sobic002G373001 Sobic002G373001 Sobic004G095600--Sobic002G373001 Sobic001G226800 Sobic001G226800 Sobic004G095600--Sobic001G226800 Sobic004G095600--Sobic006G131600 Sobic002G034500 Sobic002G034500 Sobic004G095600--Sobic002G034500 Sobic003G102200 Sobic003G102200 Sobic004G095600--Sobic003G102200 Sobic002G092801 Sobic002G092801 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic004G095600--Sobic007G165701 Sobic003G262100 Sobic003G262100 Sobic004G095600--Sobic003G262100 Sobic002G093600 Sobic002G093600 Sobic003G050350--Sobic002G093600 Sobic001G261750 Sobic001G261750 Sobic003G050350--Sobic001G261750 Sobic008G028533 Sobic008G028533 Sobic003G050350--Sobic008G028533 Sobic002G224300 Sobic002G224300 Sobic003G050350--Sobic002G224300 Sobic002G391700 Sobic002G391700 Sobic003G050350--Sobic002G391700 Sobic008G025300--Sobic003G050350 Sobic008G025300--Sobic009G014600 Sobic008G025300--Sobic001G056500 Sobic008G025300--Sobic008G038100 Sobic003G310500 Sobic003G310500 Sobic008G025300--Sobic003G310500 Sobic001G345400 Sobic001G345400 Sobic008G025300--Sobic001G345400 Sobic002G298400 Sobic002G298400 Sobic008G025300--Sobic002G298400 Sobic007G055600 Sobic007G055600 Sobic008G025300--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic008G025300--Sobic007G076000 Sobic008G181300 Sobic008G181300 Sobic009G192100--Sobic008G181300 Sobic002G407200 Sobic002G407200 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic008G018600 Sobic008G018600 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic009G192100--Sobic008G038100 Sobic009G192100--Sobic001G345400 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic009G014600--Sobic007G076000 Sobic009G014600--Sobic007G055600 Sobic002G040400 Sobic002G040400 Sobic009G014600--Sobic002G040400 Sobic006G005500 Sobic006G005500 Sobic009G014600--Sobic006G005500 Sobic008G028600 Sobic008G028600 Sobic009G014600--Sobic008G028600 Sobic001G125700 Sobic001G125700 Sobic009G014600--Sobic001G125700 Sobic002G087500 Sobic002G087500 Sobic009G014600--Sobic002G087500 Sobic005G182701 Sobic005G182701 Sobic009G014600--Sobic005G182701 Sobic005G219000 Sobic005G219000 Sobic009G014600--Sobic005G219000 Sobic008G038100--Sobic001G056500 Sobic008G038100--Sobic003G310500 Sobic009G216050 Sobic009G216050 Sobic008G038100--Sobic009G216050 Sobic008G038100--Sobic009G014600 Sobic009G233900 Sobic009G233900 Sobic008G038100--Sobic009G233900 Sobic008G038100--Sobic008G181300 Sobic004G217700 Sobic004G217700 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic006G045000 Sobic006G045000 Sobic008G038100--Sobic006G045000 Sobic008G028566 Sobic008G028566 Sobic008G127800--Sobic008G028566 Sobic008G127800--Sobic008G028533 Sobic008G127800--Sobic003G050350 Sobic008G127800--Sobic001G261750 Sobic008G127800--Sobic002G093600 Sobic006G131600--Sobic004G095600 Sobic006G131600--Sobic002G373001 Sobic010G267600 Sobic010G267600 Sobic006G131600--Sobic010G267600 Sobic006G131600--Sobic002G092801 Sobic003G110200 Sobic003G110200 Sobic006G131600--Sobic003G110200 Sobic006G131600--Sobic001G226800 Sobic003G082600 Sobic003G082600 Sobic006G131600--Sobic003G082600 Sobic003G202200 Sobic003G202200 Sobic006G131600--Sobic003G202200 Sobic006G131600--Sobic002G034500 Sobic001G056500--Sobic009G014600 Sobic001G056500--Sobic005G182701 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic001G056500--Sobic004G217700 Sobic001G056500--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056500--Sobic002G423600 Sobic001G056500--Sobic006G005500 Sobic001G056500--Sobic001G125700
Octagon: transcription factors


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