Gene annotation
Transcriptome id Sobic.003G086200.1
Synonym Sb03g007240
Functional annotation expressed protein
UniProt A0A1B6Q228
Pfam PF15699
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g03940.1 : expressed protein
MaizeGDB (Corn) Zm00025a023624
Brachypodium -
Barley HORVU3Hr1G003600.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
2 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
4 Sobic.003G248901 - -
5 Sobic.009G216050 - -
6 Sobic.006G045000 drought-induced protein 1, putative, expressed -
7 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
8 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
9 Sobic.009G233900 dehydrogenase, putative, expressed -
10 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
12 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
13 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G174000 expressed protein -
15 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
16 Sobic.005G182701 - -
17 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
18 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
20 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein


Gene co-expression network
sample Sobic003G086200 Sobic003G086200 Sobic001G056500 Sobic001G056500 Sobic003G086200--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic003G086200--Sobic008G038100 Sobic009G014600 Sobic009G014600 Sobic003G086200--Sobic009G014600 Sobic003G248901 Sobic003G248901 Sobic003G086200--Sobic003G248901 Sobic009G216050 Sobic009G216050 Sobic003G086200--Sobic009G216050 Sobic006G045000 Sobic006G045000 Sobic003G086200--Sobic006G045000 Sobic009G192100 Sobic009G192100 Sobic003G086200--Sobic009G192100 Sobic003G310200 Sobic003G310200 Sobic003G086200--Sobic003G310200 Sobic009G233900 Sobic009G233900 Sobic003G086200--Sobic009G233900 Sobic001G056500--Sobic009G014600 Sobic005G182701 Sobic005G182701 Sobic001G056500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic004G217700 Sobic004G217700 Sobic001G056500--Sobic004G217700 Sobic007G076000 Sobic007G076000 Sobic001G056500--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056500--Sobic002G423600 Sobic006G005500 Sobic006G005500 Sobic001G056500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic001G056500--Sobic001G125700 Sobic008G038100--Sobic001G056500 Sobic003G310500 Sobic003G310500 Sobic008G038100--Sobic003G310500 Sobic008G038100--Sobic009G216050 Sobic008G038100--Sobic009G014600 Sobic008G038100--Sobic009G233900 Sobic008G181300 Sobic008G181300 Sobic008G038100--Sobic008G181300 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic008G038100--Sobic006G045000 Sobic009G014600--Sobic007G076000 Sobic009G014600--Sobic007G055600 Sobic002G040400 Sobic002G040400 Sobic009G014600--Sobic002G040400 Sobic009G014600--Sobic006G005500 Sobic008G028600 Sobic008G028600 Sobic009G014600--Sobic008G028600 Sobic009G014600--Sobic001G125700 Sobic002G087500 Sobic002G087500 Sobic009G014600--Sobic002G087500 Sobic009G014600--Sobic005G182701 Sobic005G219000 Sobic005G219000 Sobic009G014600--Sobic005G219000 Sobic003G248901--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic003G248901--Sobic010G214200 SobicK044407 SobicK044407 Sobic003G248901--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic003G248901--Sobic001G012000 Sobic003G378301 Sobic003G378301 Sobic003G248901--Sobic003G378301 Sobic003G248901--Sobic001G056400 Sobic003G248901--Sobic003G310200 Sobic006G123400 Sobic006G123400 Sobic003G248901--Sobic006G123400 Sobic001G320700 Sobic001G320700 Sobic003G248901--Sobic001G320700 Sobic004G209500 Sobic004G209500 Sobic009G216050--Sobic004G209500 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic004G101000 Sobic004G101000 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 Sobic009G216050--SobicK044407 Sobic002G407200 Sobic002G407200 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic006G045000--Sobic002G423600 Sobic006G045000--Sobic003G378301 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic006G045000--Sobic004G217700 Sobic009G192100--Sobic008G181300 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic008G018600 Sobic008G018600 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic009G192100--Sobic008G038100 Sobic001G345400 Sobic001G345400 Sobic009G192100--Sobic001G345400 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic003G310200--SobicK044407 Sobic003G310200--Sobic001G012000 Sobic003G310200--Sobic003G378301 Sobic003G310200--Sobic001G056400 Sobic003G310200--Sobic008G181801 Sobic003G310200--Sobic006G045000 Sobic003G310200--Sobic002G423600 Sobic003G310200--Sobic004G217700 Sobic010G130800 Sobic010G130800 Sobic003G310200--Sobic010G130800 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic009G233900--Sobic004G078600 Sobic009G233900--Sobic004G217700 Sobic009G233900--Sobic001G201800 Sobic001G449800 Sobic001G449800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400
Octagon: transcription factors


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