Gene annotation
Transcriptome id Sobic.006G131600.1
Synonym Sb06g021150
Functional annotation OsCML22 - Calmodulin-related calcium sensor protein, expressed
UniProt C5YBE2
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF642
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03290 : EF hand calcium-binding protein family
RAP-DB (Rice) LOC_Os04g41540.1 : OsCML22 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a010861
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G131600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
2 Sobic.002G373001 - -
3 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
4 Sobic.002G092801 - -
5 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
6 Sobic.001G226800 zinc finger family protein, putative, expressed -
7 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
8 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
9 Sobic.002G034500 ERD4 protein, putative, expressed -
10 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
12 Sobic.007G149300 expressed protein -
13 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
14 Sobic.002G403300 expressed protein -
15 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
16 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
17 Sobic.002G214800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.007G123300 C1-like domain containing protein, expressed -
19 Sobic.002G405600 early response to dehydration 15, putative, expressed -
20 Sobic.002G057600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic006G131600 Sobic006G131600 Sobic004G095600 Sobic004G095600 Sobic006G131600--Sobic004G095600 Sobic002G373001 Sobic002G373001 Sobic006G131600--Sobic002G373001 Sobic010G267600 Sobic010G267600 Sobic006G131600--Sobic010G267600 Sobic002G092801 Sobic002G092801 Sobic006G131600--Sobic002G092801 Sobic003G110200 Sobic003G110200 Sobic006G131600--Sobic003G110200 Sobic001G226800 Sobic001G226800 Sobic006G131600--Sobic001G226800 Sobic003G082600 Sobic003G082600 Sobic006G131600--Sobic003G082600 Sobic003G202200 Sobic003G202200 Sobic006G131600--Sobic003G202200 Sobic002G034500 Sobic002G034500 Sobic006G131600--Sobic002G034500 Sobic004G095600--Sobic002G373001 Sobic004G095600--Sobic001G226800 Sobic004G095600--Sobic006G131600 Sobic004G095600--Sobic002G034500 Sobic003G102200 Sobic003G102200 Sobic004G095600--Sobic003G102200 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic007G165701 Sobic007G165701 Sobic004G095600--Sobic007G165701 Sobic003G262100 Sobic003G262100 Sobic004G095600--Sobic003G262100 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic002G373001--Sobic004G095600 Sobic010G267600--Sobic003G202200 Sobic003G092900 Sobic003G092900 Sobic010G267600--Sobic003G092900 Sobic007G149300 Sobic007G149300 Sobic010G267600--Sobic007G149300 Sobic002G405600 Sobic002G405600 Sobic010G267600--Sobic002G405600 Sobic001G383700 Sobic001G383700 Sobic010G267600--Sobic001G383700 Sobic009G247900 Sobic009G247900 Sobic010G267600--Sobic009G247900 Sobic010G267600--Sobic001G449700 Sobic010G204600 Sobic010G204600 Sobic010G267600--Sobic010G204600 Sobic001G259700 Sobic001G259700 Sobic010G267600--Sobic001G259700 Sobic002G092801--Sobic003G110200 Sobic002G092801--Sobic001G449700 Sobic002G092801--Sobic003G102200 Sobic002G092801--Sobic003G021500 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic002G092801--Sobic003G202200 Sobic002G092801--Sobic002G034500 Sobic002G092801--Sobic007G149300 Sobic003G110200--Sobic001G449700 Sobic003G110200--Sobic003G202200 Sobic003G110200--Sobic007G149300 Sobic003G110200--Sobic002G092801 Sobic003G110200--Sobic003G102200 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic001G226800--Sobic004G095600 Sobic001G226800--Sobic006G131600 Sobic001G226800--Sobic002G373001 Sobic001G226800--Sobic004G302200 Sobic001G226800--Sobic003G110200 Sobic001G226800--Sobic003G102200 Sobic001G226800--Sobic001G449700 Sobic001G226800--Sobic002G092801 Sobic001G226800--Sobic002G034500 Sobic003G082600--Sobic010G267600 Sobic002G245800 Sobic002G245800 Sobic003G082600--Sobic002G245800 Sobic003G082600--Sobic002G405600 Sobic003G082600--Sobic003G092900 Sobic005G109000 Sobic005G109000 Sobic003G082600--Sobic005G109000 Sobic003G082600--Sobic003G202200 Sobic003G082600--Sobic001G259700 Sobic003G082600--Sobic003G102200 Sobic003G082600--Sobic003G021500 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic003G202200--Sobic001G383700 Sobic003G202200--Sobic001G449700 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic004G191400 Sobic004G191400 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic009G036000 Sobic009G036000 Sobic003G202200--Sobic009G036000 Sobic002G034500--Sobic003G021500 Sobic002G034500--Sobic002G373001 Sobic002G034500--Sobic002G082600 Sobic005G228000 Sobic005G228000 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic001G019900 Sobic001G019900 Sobic002G034500--Sobic001G019900 Sobic002G034500--Sobic001G449700 Sobic002G034500--Sobic002G092801 Sobic002G312400 Sobic002G312400 Sobic002G034500--Sobic002G312400
Octagon: transcription factors


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