Gene annotation
Transcriptome id Sobic.002G403300.1
Synonym Sb02g041790
Functional annotation expressed protein
UniProt A0A1B6QG31
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12340 : -
RAP-DB (Rice) LOC_Os07g46510.1 : expressed protein
MaizeGDB (Corn) Zm00025a052343 , Zm00025a015350
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
2 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
4 Sobic.001G088300 - -
5 Sobic.002G092801 - -
6 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
8 Sobic.002G057600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.009G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha/beta hydrolase fold, putative, expressed -
11 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.007G149300 expressed protein -
13 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
14 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.002G373001 - -
16 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
17 Sobic.007G123300 C1-like domain containing protein, expressed -
18 Sobic.009G181400 expressed protein -
19 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
20 Sobic.010G175900 peptide transporter PTR2, putative, expressed -


Gene co-expression network
sample Sobic002G403300 Sobic002G403300 Sobic003G110200 Sobic003G110200 Sobic002G403300--Sobic003G110200 Sobic003G102200 Sobic003G102200 Sobic002G403300--Sobic003G102200 Sobic001G449700 Sobic001G449700 Sobic002G403300--Sobic001G449700 Sobic001G088300 Sobic001G088300 Sobic002G403300--Sobic001G088300 Sobic002G092801 Sobic002G092801 Sobic002G403300--Sobic002G092801 Sobic001G195100 Sobic001G195100 Sobic002G403300--Sobic001G195100 Sobic009G192100 Sobic009G192100 Sobic002G403300--Sobic009G192100 Sobic002G057600 Sobic002G057600 Sobic002G403300--Sobic002G057600 Sobic006G131600 Sobic006G131600 Sobic002G403300--Sobic006G131600 Sobic003G110200--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic003G110200--Sobic003G202200 Sobic007G149300 Sobic007G149300 Sobic003G110200--Sobic007G149300 Sobic003G110200--Sobic002G092801 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic003G102200--Sobic001G195100 Sobic001G259700 Sobic001G259700 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic001G449700--Sobic003G110200 Sobic001G449700--Sobic007G149300 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G449700--Sobic001G259700 Sobic001G449700--Sobic005G186100 Sobic001G088300--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic001G088300--Sobic001G314800 Sobic001G088300--Sobic002G403300 Sobic009G136400 Sobic009G136400 Sobic001G088300--Sobic009G136400 Sobic001G526000 Sobic001G526000 Sobic001G088300--Sobic001G526000 Sobic001G088300--Sobic003G102200 Sobic009G181400 Sobic009G181400 Sobic001G088300--Sobic009G181400 Sobic007G118301 Sobic007G118301 Sobic001G088300--Sobic007G118301 Sobic002G269300 Sobic002G269300 Sobic001G088300--Sobic002G269300 Sobic002G092801--Sobic003G110200 Sobic002G092801--Sobic001G449700 Sobic002G092801--Sobic003G102200 Sobic002G092801--Sobic003G021500 Sobic002G092801--Sobic001G383700 Sobic007G123300 Sobic007G123300 Sobic002G092801--Sobic007G123300 Sobic002G092801--Sobic003G202200 Sobic002G034500 Sobic002G034500 Sobic002G092801--Sobic002G034500 Sobic002G092801--Sobic007G149300 Sobic001G195100--Sobic001G314800 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300 Sobic008G181300 Sobic008G181300 Sobic009G192100--Sobic008G181300 Sobic002G407200 Sobic002G407200 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic008G018600 Sobic008G018600 Sobic009G192100--Sobic008G018600 Sobic001G182600 Sobic001G182600 Sobic009G192100--Sobic001G182600 Sobic008G038100 Sobic008G038100 Sobic009G192100--Sobic008G038100 Sobic001G345400 Sobic001G345400 Sobic009G192100--Sobic001G345400 Sobic001G056500 Sobic001G056500 Sobic009G192100--Sobic001G056500 Sobic009G192100--Sobic002G403300 Sobic002G407700 Sobic002G407700 Sobic002G057600--Sobic002G407700 Sobic002G245800 Sobic002G245800 Sobic002G057600--Sobic002G245800 Sobic009G023200 Sobic009G023200 Sobic002G057600--Sobic009G023200 Sobic002G057600--Sobic001G449700 Sobic002G057600--Sobic003G202200 Sobic002G057600--Sobic002G373001 Sobic002G405600 Sobic002G405600 Sobic002G057600--Sobic002G405600 Sobic002G057600--Sobic007G123300 Sobic002G312400 Sobic002G312400 Sobic002G057600--Sobic002G312400 Sobic004G095600 Sobic004G095600 Sobic006G131600--Sobic004G095600 Sobic006G131600--Sobic002G373001 Sobic010G267600 Sobic010G267600 Sobic006G131600--Sobic010G267600 Sobic006G131600--Sobic002G092801 Sobic006G131600--Sobic003G110200 Sobic001G226800 Sobic001G226800 Sobic006G131600--Sobic001G226800 Sobic003G082600 Sobic003G082600 Sobic006G131600--Sobic003G082600 Sobic006G131600--Sobic003G202200 Sobic006G131600--Sobic002G034500
Octagon: transcription factors


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