Gene annotation
Transcriptome id Sobic.001G088300.2
Synonym
Functional annotation -
UniProt A0A1Z5S4W1
Pfam -
Panther DB PTHR33264 PTHR33264:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27180 : -
RAP-DB (Rice) LOC_Os10g25800.1 : expressed protein
MaizeGDB (Corn) Zm00025a016792 , Zm00025a008170
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
3 Sobic.002G403300 expressed protein -
4 Sobic.009G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha/beta hydrolase fold, putative, expressed -
5 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.009G181400 expressed protein -
8 Sobic.007G118301 - -
9 Sobic.002G269300 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
10 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
13 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
14 Sobic.010G105300 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
15 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
16 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
17 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
18 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
19 Sobic.001G518800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
20 Sobic.003G416500 SRC2 protein, putative, expressed -


Gene co-expression network
sample Sobic001G088300 Sobic001G088300 Sobic001G195100 Sobic001G195100 Sobic001G088300--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic001G088300--Sobic001G314800 Sobic002G403300 Sobic002G403300 Sobic001G088300--Sobic002G403300 Sobic009G136400 Sobic009G136400 Sobic001G088300--Sobic009G136400 Sobic001G526000 Sobic001G526000 Sobic001G088300--Sobic001G526000 Sobic003G102200 Sobic003G102200 Sobic001G088300--Sobic003G102200 Sobic009G181400 Sobic009G181400 Sobic001G088300--Sobic009G181400 Sobic007G118301 Sobic007G118301 Sobic001G088300--Sobic007G118301 Sobic002G269300 Sobic002G269300 Sobic001G088300--Sobic002G269300 Sobic001G195100--Sobic001G314800 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic001G314800--Sobic003G296300 Sobic003G310500 Sobic003G310500 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic003G110200 Sobic003G110200 Sobic002G403300--Sobic003G110200 Sobic002G403300--Sobic003G102200 Sobic001G449700 Sobic001G449700 Sobic002G403300--Sobic001G449700 Sobic002G403300--Sobic001G088300 Sobic002G092801 Sobic002G092801 Sobic002G403300--Sobic002G092801 Sobic002G403300--Sobic001G195100 Sobic009G192100 Sobic009G192100 Sobic002G403300--Sobic009G192100 Sobic002G057600 Sobic002G057600 Sobic002G403300--Sobic002G057600 Sobic006G131600 Sobic006G131600 Sobic002G403300--Sobic006G131600 Sobic001G100501 Sobic001G100501 Sobic009G136400--Sobic001G100501 Sobic009G136400--Sobic007G118301 Sobic009G136400--Sobic001G449700 Sobic002G225700 Sobic002G225700 Sobic009G136400--Sobic002G225700 Sobic006G216700 Sobic006G216700 Sobic009G136400--Sobic006G216700 Sobic001G295700 Sobic001G295700 Sobic009G136400--Sobic001G295700 Sobic001G259700 Sobic001G259700 Sobic009G136400--Sobic001G259700 Sobic003G207900 Sobic003G207900 Sobic009G136400--Sobic003G207900 Sobic001G077600 Sobic001G077600 Sobic009G136400--Sobic001G077600 Sobic006G167800 Sobic006G167800 Sobic001G526000--Sobic006G167800 Sobic001G526000--Sobic003G296300 Sobic001G526000--Sobic001G088300 Sobic001G526000--Sobic001G195100 Sobic009G100500 Sobic009G100500 Sobic001G526000--Sobic009G100500 Sobic001G526000--Sobic001G314800 Sobic006G259000 Sobic006G259000 Sobic001G526000--Sobic006G259000 Sobic001G526000--Sobic007G090300 Sobic004G110400 Sobic004G110400 Sobic001G526000--Sobic004G110400 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic003G102200--Sobic001G195100 Sobic003G102200--Sobic001G259700 Sobic001G383700 Sobic001G383700 Sobic003G102200--Sobic001G383700 Sobic007G149300 Sobic007G149300 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic009G181400--Sobic001G088300 Sobic001G510600 Sobic001G510600 Sobic009G181400--Sobic001G510600 Sobic009G181400--Sobic003G102200 Sobic002G405600 Sobic002G405600 Sobic009G181400--Sobic002G405600 Sobic003G202200 Sobic003G202200 Sobic009G181400--Sobic003G202200 Sobic009G181400--Sobic003G110200 Sobic009G181400--Sobic002G092801 Sobic009G181400--Sobic001G295700 Sobic001G204900 Sobic001G204900 Sobic009G181400--Sobic001G204900 Sobic007G118301--Sobic001G100501 Sobic007G118301--Sobic009G136400 Sobic007G118301--Sobic006G259000 Sobic007G118301--Sobic001G195100 Sobic007G118301--Sobic003G207900 Sobic007G118301--Sobic006G216700 Sobic007G118301--Sobic001G295700 Sobic010G105300 Sobic010G105300 Sobic007G118301--Sobic010G105300 Sobic003G230100 Sobic003G230100 Sobic007G118301--Sobic003G230100 Sobic002G323900 Sobic002G323900 Sobic002G269300--Sobic002G323900 Sobic002G269300--Sobic006G259000 Sobic003G416500 Sobic003G416500 Sobic002G269300--Sobic003G416500 Sobic001G489500 Sobic001G489500 Sobic002G269300--Sobic001G489500 Sobic002G269300--Sobic001G088300 Sobic002G269300--Sobic001G295700 Sobic002G269400 Sobic002G269400 Sobic002G269300--Sobic002G269400 Sobic003G331500 Sobic003G331500 Sobic002G269300--Sobic003G331500 Sobic002G386000 Sobic002G386000 Sobic002G269300--Sobic002G386000
Octagon: transcription factors


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