Gene annotation
Transcriptome id Sobic.004G297600.1
Synonym Sb04g033150, PLA-I{beta]2
Functional annotation triacylglycerol lipase like protein, putative, expressed
UniProt C5XS06
Pfam PF01764
Panther DB PTHR31403 PTHR31403:SF14
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G16820 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g43700.1 : triacylglycerol lipase like protein, putative, expressed
MaizeGDB (Corn) Zm00025a020903
Brachypodium KQK00580
Barley HORVU6Hr1G062220.1 , HORVU6Hr1G062220.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G297600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
2 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
3 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
4 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.010G105300 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
7 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G341900 - -
9 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
10 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.010G163150 - -
12 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.001G088300 - -
15 Sobic.007G118301 - -
16 Sobic.001G339200 - -
17 Sobic.007G145700 expressed protein -
18 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
19 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
20 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G297600 Sobic004G297600 Sobic006G257700 Sobic006G257700 Sobic004G297600--Sobic006G257700 Sobic010G102000 Sobic010G102000 Sobic004G297600--Sobic010G102000 Sobic009G010400 Sobic009G010400 Sobic004G297600--Sobic009G010400 Sobic001G195100 Sobic001G195100 Sobic004G297600--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic004G297600--Sobic001G314800 Sobic010G105300 Sobic010G105300 Sobic004G297600--Sobic010G105300 Sobic001G489500 Sobic001G489500 Sobic004G297600--Sobic001G489500 Sobic002G341900 Sobic002G341900 Sobic004G297600--Sobic002G341900 Sobic001G064900 Sobic001G064900 Sobic004G297600--Sobic001G064900 Sobic006G257700--Sobic001G064900 Sobic006G257700--Sobic009G010400 Sobic006G257700--Sobic010G102000 Sobic006G257700--Sobic004G297600 Sobic001G095700 Sobic001G095700 Sobic006G257700--Sobic001G095700 Sobic001G287600 Sobic001G287600 Sobic006G257700--Sobic001G287600 Sobic010G023200 Sobic010G023200 Sobic006G257700--Sobic010G023200 Sobic007G077300 Sobic007G077300 Sobic006G257700--Sobic007G077300 Sobic006G259000 Sobic006G259000 Sobic006G257700--Sobic006G259000 Sobic009G217500 Sobic009G217500 Sobic010G102000--Sobic009G217500 Sobic010G102000--Sobic010G105300 Sobic003G341100 Sobic003G341100 Sobic010G102000--Sobic003G341100 Sobic002G232800 Sobic002G232800 Sobic010G102000--Sobic002G232800 Sobic010G102000--Sobic001G064900 Sobic007G145700 Sobic007G145700 Sobic010G102000--Sobic007G145700 Sobic010G102000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic010G102000--Sobic007G077100 Sobic006G273800 Sobic006G273800 Sobic010G102000--Sobic006G273800 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic004G065900 Sobic004G065900 Sobic009G010400--Sobic004G065900 Sobic009G010400--Sobic001G064900 Sobic009G100500 Sobic009G100500 Sobic009G010400--Sobic009G100500 Sobic009G010400--Sobic006G257700 Sobic009G010400--Sobic006G259000 Sobic009G010400--Sobic001G095700 Sobic009G010400--Sobic010G102000 Sobic004G006500 Sobic004G006500 Sobic009G010400--Sobic004G006500 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G088300 Sobic001G088300 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic001G314800--Sobic003G296300 Sobic003G310500 Sobic003G310500 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic010G105300--Sobic010G102000 Sobic010G105300--Sobic006G259000 Sobic003G416500 Sobic003G416500 Sobic010G105300--Sobic003G416500 Sobic010G105300--Sobic010G023200 Sobic010G105300--Sobic009G217500 Sobic010G105300--Sobic007G077100 Sobic010G105300--Sobic001G489500 Sobic010G105300--Sobic001G064900 Sobic010G105300--Sobic002G341900 Sobic001G489500--Sobic003G416500 Sobic001G489500--Sobic010G023200 Sobic001G489500--Sobic009G217500 Sobic001G489500--Sobic006G273800 Sobic001G489500--Sobic007G077100 Sobic001G489500--Sobic006G259000 Sobic009G120800 Sobic009G120800 Sobic001G489500--Sobic009G120800 Sobic003G353800 Sobic003G353800 Sobic001G489500--Sobic003G353800 Sobic002G323900 Sobic002G323900 Sobic001G489500--Sobic002G323900 Sobic007G143400 Sobic007G143400 Sobic002G341900--Sobic007G143400 Sobic002G341900--Sobic007G145700 Sobic002G341900--Sobic010G102000 Sobic002G341900--Sobic001G064900 Sobic002G294600 Sobic002G294600 Sobic002G341900--Sobic002G294600 Sobic002G341900--Sobic001G489500 Sobic002G341900--Sobic001G095700 Sobic002G341900--Sobic006G273800 Sobic002G341900--Sobic009G217500 Sobic001G064900--Sobic010G102000 Sobic001G064900--Sobic009G217500 Sobic001G064900--Sobic006G273800 Sobic001G064900--Sobic010G023200 Sobic001G064900--Sobic006G257700 Sobic001G064900--Sobic006G259000 Sobic001G064900--Sobic007G077100 Sobic001G064900--Sobic001G095700 Sobic001G064900--Sobic003G341100
Octagon: transcription factors


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