Gene annotation
Transcriptome id Sobic.006G014700.1
Synonym SbCAD6;SbCAD6, ATCAD9, CAD9, Sb06g001430
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Cinnamyl alcohol dehydrogenase (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
dehydrogenase, putative, expressed
UniProt C5YC51
Pfam PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF556
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G39330 : cinnamyl alcohol dehydrogenase 9
RAP-DB (Rice) LOC_Os04g15920.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a012285 , Zm00025a054868 , Zm00025a046899
Brachypodium KQJ81961 , KQJ94446
Barley HORVU0Hr1G012860.5 , HORVU0Hr1G012860.4 , HORVU0Hr1G012860.3 , HORVU0Hr1G012860.2 , HORVU0Hr1G012860.1 , HORVU1Hr1G007800.2 , HORVU1Hr1G007800.3 , HORVU1Hr1G007800.1 , HORVU1Hr1G007800.6 , HORVU1Hr1G007800.7 , HORVU1Hr1G007800.4 , HORVU1Hr1G007800.5 , HORVU2Hr1G010830.1 , HORVU2Hr1G010830.2 , HORVU2Hr1G010830.3 , HORVU2Hr1G010830.4 , HORVU2Hr1G010830.5 , HORVU2Hr1G010830.6 , HORVU2Hr1G010830.7 , HORVU2Hr1G010840.1
Wheat TraesCS2D02G069800 , TraesCS5D02G210700 , TraesCS2B02G084600 , TraesCS2A02G070900 , TraesCS2B02G084500 , TraesCS5A02G205600 , TraesCS5B02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
4 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
5 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
6 Sobic.009G216050 - -
7 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
9 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.009G038000 expressed protein -
11 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G339200 - -
16 Sobic.003G213900 expressed protein -
17 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.004G174000 expressed protein -
19 Sobic.001G381300 WRKY79, expressed -
20 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase


Gene co-expression network
sample Sobic006G014700 Sobic006G014700 Sobic001G314800 Sobic001G314800 Sobic006G014700--Sobic001G314800 Sobic002G216500 Sobic002G216500 Sobic006G014700--Sobic002G216500 Sobic002G160600 Sobic002G160600 Sobic006G014700--Sobic002G160600 Sobic003G310500 Sobic003G310500 Sobic006G014700--Sobic003G310500 Sobic006G265000 Sobic006G265000 Sobic006G014700--Sobic006G265000 Sobic009G216050 Sobic009G216050 Sobic006G014700--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic006G014700--Sobic010G214200 Sobic002G407200 Sobic002G407200 Sobic006G014700--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic006G014700--Sobic008G018600 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic001G314800--Sobic006G014700 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic001G314800--Sobic002G407200 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic006G045000 Sobic006G045000 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic004G209500 Sobic004G209500 Sobic002G216500--Sobic004G209500 Sobic002G216500--Sobic006G014700 Sobic003G378301 Sobic003G378301 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic004G217700 Sobic004G217700 Sobic002G216500--Sobic004G217700 Sobic007G064800 Sobic007G064800 Sobic002G160600--Sobic007G064800 Sobic002G160600--Sobic006G014700 Sobic002G160600--Sobic005G218500 Sobic002G160600--Sobic002G216500 Sobic002G160600--Sobic001G314800 Sobic008G075400 Sobic008G075400 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic002G160600--Sobic006G265000 Sobic007G183100 Sobic007G183100 Sobic002G160600--Sobic007G183100 Sobic001G056500 Sobic001G056500 Sobic003G310500--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 Sobic006G265000--Sobic001G314800 Sobic006G265000--Sobic006G014700 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic006G265000--Sobic002G160600 Sobic006G265000--Sobic003G310500 Sobic007G196600 Sobic007G196600 Sobic006G265000--Sobic007G196600 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic009G216050--Sobic004G209500 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic010G214200--Sobic006G045000 Sobic010G214200--Sobic004G209500 Sobic010G214200--Sobic004G217700 Sobic010G214200--Sobic001G056500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic002G423600 Sobic002G423600 Sobic010G214200--Sobic002G423600 Sobic010G214200--Sobic003G310500 Sobic010G214200--SobicK044407 Sobic002G407200--Sobic008G018600 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic002G407200--Sobic004G217700 Sobic002G407200--Sobic004G101000 Sobic002G407200--Sobic001G314800 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic002G407200--Sobic008G038100 Sobic008G018600--Sobic002G407200 Sobic008G018600--Sobic001G056500 Sobic008G018600--Sobic004G195800 Sobic008G018600--Sobic009G216050 Sobic008G018600--Sobic010G214200 Sobic008G018600--Sobic004G217700 Sobic008G018600--Sobic001G314800 Sobic008G018600--Sobic008G181300 Sobic001G182600 Sobic001G182600 Sobic008G018600--Sobic001G182600
Octagon: transcription factors


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