Gene annotation
Transcriptome id Sobic.009G038000.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P6J0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g05020.1 : expressed protein
MaizeGDB (Corn) Zm00025a055364
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
3 Sobic.003G296300 WRKY13, expressed -
4 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
5 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
7 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.009G216050 - -
12 Sobic.003G213900 expressed protein -
13 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
14 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
15 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
16 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
17 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.008G181300 expressed protein -
19 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
20 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -


Gene co-expression network
sample Sobic009G038000 Sobic009G038000 Sobic004G101000 Sobic004G101000 Sobic009G038000--Sobic004G101000 Sobic001G345400 Sobic001G345400 Sobic009G038000--Sobic001G345400 Sobic003G296300 Sobic003G296300 Sobic009G038000--Sobic003G296300 Sobic004G140000 Sobic004G140000 Sobic009G038000--Sobic004G140000 Sobic006G014700 Sobic006G014700 Sobic009G038000--Sobic006G014700 Sobic002G407200 Sobic002G407200 Sobic009G038000--Sobic002G407200 Sobic008G038100 Sobic008G038100 Sobic009G038000--Sobic008G038100 Sobic001G314800 Sobic001G314800 Sobic009G038000--Sobic001G314800 Sobic002G216500 Sobic002G216500 Sobic009G038000--Sobic002G216500 Sobic004G101000--Sobic001G345400 Sobic009G216050 Sobic009G216050 Sobic004G101000--Sobic009G216050 Sobic004G101000--Sobic003G296300 Sobic004G101000--Sobic009G038000 Sobic004G101000--Sobic002G407200 Sobic010G214200 Sobic010G214200 Sobic004G101000--Sobic010G214200 Sobic004G101000--Sobic001G314800 Sobic001G195100 Sobic001G195100 Sobic004G101000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic004G101000--Sobic003G310500 Sobic001G345400--Sobic003G296300 Sobic001G345400--Sobic004G101000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic006G246100 Sobic006G246100 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic009G192100 Sobic009G192100 Sobic001G345400--Sobic009G192100 Sobic001G345400--Sobic008G038100 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic004G140000--Sobic009G038000 Sobic004G140000--Sobic002G216500 Sobic002G160600 Sobic002G160600 Sobic004G140000--Sobic002G160600 Sobic004G140000--Sobic008G038100 Sobic004G140000--Sobic001G314800 Sobic004G140000--Sobic003G310500 Sobic004G140000--Sobic010G214200 Sobic006G265000 Sobic006G265000 Sobic004G140000--Sobic006G265000 Sobic004G140000--Sobic004G101000 Sobic006G014700--Sobic001G314800 Sobic006G014700--Sobic002G216500 Sobic006G014700--Sobic002G160600 Sobic006G014700--Sobic003G310500 Sobic006G014700--Sobic006G265000 Sobic006G014700--Sobic009G216050 Sobic006G014700--Sobic010G214200 Sobic006G014700--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic006G014700--Sobic008G018600 Sobic002G407200--Sobic008G018600 Sobic001G056500 Sobic001G056500 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic004G217700 Sobic004G217700 Sobic002G407200--Sobic004G217700 Sobic002G407200--Sobic004G101000 Sobic002G407200--Sobic001G314800 Sobic002G407200--Sobic003G310500 Sobic002G407200--Sobic009G192100 Sobic002G407200--Sobic008G038100 Sobic008G038100--Sobic001G056500 Sobic008G038100--Sobic003G310500 Sobic008G038100--Sobic009G216050 Sobic009G014600 Sobic009G014600 Sobic008G038100--Sobic009G014600 Sobic009G233900 Sobic009G233900 Sobic008G038100--Sobic009G233900 Sobic008G181300 Sobic008G181300 Sobic008G038100--Sobic008G181300 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic006G045000 Sobic006G045000 Sobic008G038100--Sobic006G045000 Sobic001G314800--Sobic001G195100 Sobic001G314800--Sobic006G014700 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic001G314800--Sobic002G407200 Sobic001G314800--Sobic008G018600 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic001G314800--Sobic008G181300 Sobic004G220600 Sobic004G220600 Sobic002G216500--Sobic004G220600 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic004G209500 Sobic004G209500 Sobic002G216500--Sobic004G209500 Sobic002G216500--Sobic006G014700 Sobic003G378301 Sobic003G378301 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic002G216500--Sobic004G217700
Octagon: transcription factors


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