Gene annotation
Transcriptome id Sobic.001G314800.1
Synonym Sb01g030610, SUE4
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5WUF1
Pfam -
Panther DB PTHR34953 PTHR34953:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40095 : Alpha/beta hydrolase related protein
RAP-DB (Rice) LOC_Os10g39090.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a052242 , Zm00025a003146 , Zm00025a000324
Brachypodium KQJ97588 , KQK23912
Barley -
Wheat TraesCS1B02G234900 , TraesCS1D02G223400 , TraesCS1A02G221700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
3 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
4 Sobic.001G088300 - -
5 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
6 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.003G296300 WRKY13, expressed -
8 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
9 Sobic.008G181300 expressed protein -
10 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
11 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
14 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.009G038000 expressed protein -
16 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
17 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
18 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
19 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
20 Sobic.003G262100 expressed protein -


Gene co-expression network
sample Sobic001G314800 Sobic001G314800 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic003G310500 Sobic003G310500 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic007G090300 Sobic007G090300 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic001G195100--Sobic003G296300 Sobic006G014700--Sobic001G314800 Sobic002G216500 Sobic002G216500 Sobic006G014700--Sobic002G216500 Sobic002G160600 Sobic002G160600 Sobic006G014700--Sobic002G160600 Sobic006G014700--Sobic003G310500 Sobic006G014700--Sobic006G265000 Sobic009G216050 Sobic009G216050 Sobic006G014700--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic006G014700--Sobic010G214200 Sobic006G014700--Sobic002G407200 Sobic006G014700--Sobic008G018600 Sobic006G265000--Sobic001G314800 Sobic006G265000--Sobic006G014700 Sobic006G265000--Sobic010G214200 Sobic004G101000 Sobic004G101000 Sobic006G265000--Sobic004G101000 Sobic006G265000--Sobic002G160600 Sobic006G265000--Sobic003G310500 Sobic007G196600 Sobic007G196600 Sobic006G265000--Sobic007G196600 Sobic004G140000 Sobic004G140000 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic001G088300--Sobic001G195100 Sobic001G088300--Sobic001G314800 Sobic002G403300 Sobic002G403300 Sobic001G088300--Sobic002G403300 Sobic009G136400 Sobic009G136400 Sobic001G088300--Sobic009G136400 Sobic001G526000 Sobic001G526000 Sobic001G088300--Sobic001G526000 Sobic001G088300--Sobic003G102200 Sobic009G181400 Sobic009G181400 Sobic001G088300--Sobic009G181400 Sobic001G088300--Sobic007G118301 Sobic002G269300 Sobic002G269300 Sobic001G088300--Sobic002G269300 Sobic002G407200--Sobic008G018600 Sobic001G056500 Sobic001G056500 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic004G217700 Sobic004G217700 Sobic002G407200--Sobic004G217700 Sobic002G407200--Sobic004G101000 Sobic002G407200--Sobic001G314800 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic002G407200--Sobic008G038100 Sobic008G018600--Sobic002G407200 Sobic008G018600--Sobic001G056500 Sobic004G195800 Sobic004G195800 Sobic008G018600--Sobic004G195800 Sobic008G018600--Sobic009G216050 Sobic008G018600--Sobic010G214200 Sobic008G018600--Sobic004G217700 Sobic008G018600--Sobic001G314800 Sobic008G018600--Sobic008G181300 Sobic001G182600 Sobic001G182600 Sobic008G018600--Sobic001G182600 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic003G296300--Sobic001G526000 Sobic003G296300--Sobic001G195100 Sobic003G310500--Sobic001G056500 Sobic003G310500--Sobic008G038100 Sobic004G209500 Sobic004G209500 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic003G310500--Sobic002G216500 Sobic006G045000 Sobic006G045000 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 Sobic008G181300--Sobic009G192100 Sobic008G181300--Sobic003G310500 Sobic009G233900 Sobic009G233900 Sobic008G181300--Sobic009G233900 Sobic008G181300--Sobic008G038100 Sobic008G181300--Sobic008G018600 Sobic008G181300--Sobic001G314800 Sobic008G181300--Sobic002G407200 Sobic008G181300--Sobic009G216050 Sobic008G181300--Sobic004G209500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.