Gene annotation
Transcriptome id Sobic.002G269300.1
Synonym (SbDREB1);ethylene response factor 27, ATCBF3, CBF3, DREB1A, dehydration response element binding (DREB) transcription factor, Sb02g030320, SbERF27;SbCBF6
Functional annotation "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. " (PubMedID : 24086146)
Not investigated (PubMedID : 23766026)
highly upregulated during chilling in a chilling tolerant sorghum NSG (PubMedID : 29293808)
dehydration-responsive element-binding protein, putative, expressed
UniProt C5X626
Pfam PF00847
Panther DB PTHR31839 PTHR31839:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G25480 : dehydration response element B1A
RAP-DB (Rice) LOC_Os09g35030.1 : dehydration-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a014384 , Zm00025a047706 , Zm00025a047704 , Zm00025a057002 , Zm00025a042509 , Zm00025a009843
Brachypodium KQK19645 , KQJ91109 , PNT61818
Barley HORVU6Hr1G089320.1 , HORVU5Hr1G080450.1 , HORVU5Hr1G080450.2 , HORVU5Hr1G080400.1 , HORVU5Hr1G080340.2
Wheat TraesCS6A02G186400
Populus -


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cDNA sequences
Sobic.002G269300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G323900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PRAS-rich protein, putative, expressed -
2 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.003G416500 SRC2 protein, putative, expressed -
4 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G088300 - -
6 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
7 Sobic.002G269400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
8 Sobic.003G331500 NHL25, putative, expressed -
9 Sobic.002G386000 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.007G118301 - -
11 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.003G331600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX168 - F-box domain containing protein, expressed -
14 Sobic.002G405600 early response to dehydration 15, putative, expressed -
15 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G105300 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
17 Sobic.001G138200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
19 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
20 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -


Gene co-expression network
sample Sobic002G269300 Sobic002G269300 Sobic002G323900 Sobic002G323900 Sobic002G269300--Sobic002G323900 Sobic006G259000 Sobic006G259000 Sobic002G269300--Sobic006G259000 Sobic003G416500 Sobic003G416500 Sobic002G269300--Sobic003G416500 Sobic001G489500 Sobic001G489500 Sobic002G269300--Sobic001G489500 Sobic001G088300 Sobic001G088300 Sobic002G269300--Sobic001G088300 Sobic001G295700 Sobic001G295700 Sobic002G269300--Sobic001G295700 Sobic002G269400 Sobic002G269400 Sobic002G269300--Sobic002G269400 Sobic003G331500 Sobic003G331500 Sobic002G269300--Sobic003G331500 Sobic002G386000 Sobic002G386000 Sobic002G269300--Sobic002G386000 Sobic002G323900--Sobic006G259000 Sobic002G323900--Sobic003G416500 Sobic007G077100 Sobic007G077100 Sobic002G323900--Sobic007G077100 Sobic002G323900--Sobic001G489500 Sobic010G023200 Sobic010G023200 Sobic002G323900--Sobic010G023200 Sobic004G086800 Sobic004G086800 Sobic002G323900--Sobic004G086800 Sobic002G323900--Sobic002G269300 Sobic001G064900 Sobic001G064900 Sobic002G323900--Sobic001G064900 Sobic009G010400 Sobic009G010400 Sobic002G323900--Sobic009G010400 Sobic006G259000--Sobic003G416500 Sobic006G259000--Sobic002G323900 Sobic006G259000--Sobic010G023200 Sobic006G259000--Sobic007G077100 Sobic010G105300 Sobic010G105300 Sobic006G259000--Sobic010G105300 Sobic006G259000--Sobic001G064900 Sobic006G259000--Sobic001G489500 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500 Sobic003G416500--Sobic001G489500 Sobic003G416500--Sobic010G023200 Sobic003G416500--Sobic006G259000 Sobic003G416500--Sobic007G077100 Sobic003G416500--Sobic009G217500 Sobic006G273800 Sobic006G273800 Sobic003G416500--Sobic006G273800 Sobic009G120800 Sobic009G120800 Sobic003G416500--Sobic009G120800 Sobic003G416500--Sobic002G323900 Sobic003G416500--Sobic010G105300 Sobic001G489500--Sobic003G416500 Sobic001G489500--Sobic010G023200 Sobic001G489500--Sobic009G217500 Sobic001G489500--Sobic006G273800 Sobic001G489500--Sobic007G077100 Sobic001G489500--Sobic006G259000 Sobic001G489500--Sobic009G120800 Sobic003G353800 Sobic003G353800 Sobic001G489500--Sobic003G353800 Sobic001G489500--Sobic002G323900 Sobic001G195100 Sobic001G195100 Sobic001G088300--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic001G088300--Sobic001G314800 Sobic002G403300 Sobic002G403300 Sobic001G088300--Sobic002G403300 Sobic009G136400 Sobic009G136400 Sobic001G088300--Sobic009G136400 Sobic001G526000 Sobic001G526000 Sobic001G088300--Sobic001G526000 Sobic003G102200 Sobic003G102200 Sobic001G088300--Sobic003G102200 Sobic009G181400 Sobic009G181400 Sobic001G088300--Sobic009G181400 Sobic007G118301 Sobic007G118301 Sobic001G088300--Sobic007G118301 Sobic001G088300--Sobic002G269300 Sobic002G358300 Sobic002G358300 Sobic001G295700--Sobic002G358300 Sobic001G259700 Sobic001G259700 Sobic001G295700--Sobic001G259700 Sobic002G269100 Sobic002G269100 Sobic001G295700--Sobic002G269100 Sobic004G308900 Sobic004G308900 Sobic001G295700--Sobic004G308900 Sobic004G097100 Sobic004G097100 Sobic001G295700--Sobic004G097100 Sobic001G100501 Sobic001G100501 Sobic001G295700--Sobic001G100501 Sobic002G395300 Sobic002G395300 Sobic001G295700--Sobic002G395300 Sobic004G169200 Sobic004G169200 Sobic001G295700--Sobic004G169200 Sobic003G230100 Sobic003G230100 Sobic001G295700--Sobic003G230100 Sobic002G269400--Sobic002G269300 Sobic010G179800 Sobic010G179800 Sobic002G269400--Sobic010G179800 Sobic002G376000 Sobic002G376000 Sobic002G269400--Sobic002G376000 Sobic004G110400 Sobic004G110400 Sobic002G269400--Sobic004G110400 Sobic008G018600 Sobic008G018600 Sobic002G269400--Sobic008G018600 Sobic002G269400--Sobic001G088300 Sobic006G167800 Sobic006G167800 Sobic002G269400--Sobic006G167800 Sobic002G269400--Sobic001G526000 Sobic005G063900 Sobic005G063900 Sobic002G269400--Sobic005G063900 Sobic003G331500--Sobic002G269300 Sobic003G331600 Sobic003G331600 Sobic003G331500--Sobic003G331600 Sobic003G331500--Sobic002G269400 Sobic003G331500--Sobic010G179800 Sobic003G331500--Sobic009G181400 Sobic004G228100 Sobic004G228100 Sobic003G331500--Sobic004G228100 Sobic003G331500--Sobic006G167800 Sobic003G331500--Sobic002G376000 Sobic002G328550 Sobic002G328550 Sobic003G331500--Sobic002G328550 Sobic004G228900 Sobic004G228900 Sobic002G386000--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic002G386000--Sobic001G426000 Sobic001G338600 Sobic001G338600 Sobic002G386000--Sobic001G338600 Sobic010G104300 Sobic010G104300 Sobic002G386000--Sobic010G104300 Sobic001G425600 Sobic001G425600 Sobic002G386000--Sobic001G425600 Sobic004G273300 Sobic004G273300 Sobic002G386000--Sobic004G273300 Sobic001G425500 Sobic001G425500 Sobic002G386000--Sobic001G425500 Sobic003G350700 Sobic003G350700 Sobic002G386000--Sobic003G350700 Sobic004G109700 Sobic004G109700 Sobic002G386000--Sobic004G109700
Octagon: transcription factors


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