Gene annotation
Transcriptome id Sobic.002G214800.1
Synonym JAZ, TIFY10A, JAZ1, Sb02g025720
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
tran- scriptional repressor JASMONATE ZIM-DOMAIN (PubMedID : 25711704)
zinc-finger protein, putative, expressed
UniProt C5XDP2
Pfam PF06200 PF09425
Panther DB PTHR33077 PTHR33077:SF12
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19180 : jasmonate-zim-domain protein 1
RAP-DB (Rice) LOC_Os09g26780.1 : zinc-finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a013983 , Zm00025a047140
Brachypodium -
Barley -
Wheat TraesCS5B02G211000 , TraesCS5A02G212800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G109000 cytochrome P450, putative, expressed -
2 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.002G202100 expressed protein -
4 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
5 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
6 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
8 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
9 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
10 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
11 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
12 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.002G373001 - -
14 Sobic.010G209100 WRKY28, expressed -
15 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
16 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
17 Sobic.003G092900 expressed protein -
18 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
19 Sobic.001G489600 expressed protein -
20 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic002G214800 Sobic002G214800 Sobic005G109000 Sobic005G109000 Sobic002G214800--Sobic005G109000 Sobic007G151100 Sobic007G151100 Sobic002G214800--Sobic007G151100 Sobic002G202100 Sobic002G202100 Sobic002G214800--Sobic002G202100 Sobic004G186500 Sobic004G186500 Sobic002G214800--Sobic004G186500 Sobic003G082600 Sobic003G082600 Sobic002G214800--Sobic003G082600 Sobic009G069700 Sobic009G069700 Sobic002G214800--Sobic009G069700 Sobic002G374100 Sobic002G374100 Sobic002G214800--Sobic002G374100 Sobic002G245800 Sobic002G245800 Sobic002G214800--Sobic002G245800 Sobic010G083600 Sobic010G083600 Sobic002G214800--Sobic010G083600 Sobic010G209100 Sobic010G209100 Sobic005G109000--Sobic010G209100 Sobic005G109000--Sobic002G214800 Sobic005G109000--Sobic002G202100 Sobic005G109000--Sobic007G151100 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic001G259600 Sobic001G259600 Sobic005G109000--Sobic001G259600 Sobic005G109000--Sobic010G083600 Sobic001G449700 Sobic001G449700 Sobic005G109000--Sobic001G449700 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic002G140300 Sobic002G140300 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic007G151100--Sobic002G036100 Sobic002G202100--Sobic005G109000 Sobic002G202100--Sobic002G214800 Sobic002G202100--Sobic010G209100 Sobic002G202100--Sobic001G259600 Sobic001G259700 Sobic001G259700 Sobic002G202100--Sobic001G259700 Sobic006G194100 Sobic006G194100 Sobic002G202100--Sobic006G194100 Sobic002G405600 Sobic002G405600 Sobic002G202100--Sobic002G405600 Sobic002G202100--Sobic007G151100 Sobic006G231100 Sobic006G231100 Sobic002G202100--Sobic006G231100 Sobic002G070200 Sobic002G070200 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic001G536500 Sobic001G536500 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic004G186500--Sobic005G028700 Sobic003G082600--Sobic010G267600 Sobic003G082600--Sobic002G245800 Sobic003G082600--Sobic002G405600 Sobic003G092900 Sobic003G092900 Sobic003G082600--Sobic003G092900 Sobic003G082600--Sobic005G109000 Sobic003G202200 Sobic003G202200 Sobic003G082600--Sobic003G202200 Sobic003G082600--Sobic001G259700 Sobic003G102200 Sobic003G102200 Sobic003G082600--Sobic003G102200 Sobic003G021500 Sobic003G021500 Sobic003G082600--Sobic003G021500 Sobic009G069700--Sobic003G158500 Sobic008G139600 Sobic008G139600 Sobic009G069700--Sobic008G139600 Sobic001G247300 Sobic001G247300 Sobic009G069700--Sobic001G247300 Sobic004G169300 Sobic004G169300 Sobic009G069700--Sobic004G169300 Sobic003G360000 Sobic003G360000 Sobic009G069700--Sobic003G360000 Sobic010G036800 Sobic010G036800 Sobic009G069700--Sobic010G036800 Sobic003G264500 Sobic003G264500 Sobic009G069700--Sobic003G264500 Sobic001G407800 Sobic001G407800 Sobic009G069700--Sobic001G407800 Sobic009G069700--Sobic007G151100 Sobic002G294700 Sobic002G294700 Sobic002G374100--Sobic002G294700 Sobic010G246000 Sobic010G246000 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic010G228000 Sobic010G228000 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G353400 Sobic002G353400 Sobic002G374100--Sobic002G353400 Sobic008G177800 Sobic008G177800 Sobic002G374100--Sobic008G177800 Sobic002G118600 Sobic002G118600 Sobic002G374100--Sobic002G118600 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic003G324400 Sobic003G324400 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic009G023200 Sobic009G023200 Sobic002G245800--Sobic009G023200 Sobic001G095300 Sobic001G095300 Sobic002G245800--Sobic001G095300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic010G083600--Sobic010G209100 Sobic010G083600--Sobic005G109000 Sobic001G059400 Sobic001G059400 Sobic010G083600--Sobic001G059400 Sobic003G341100 Sobic003G341100 Sobic010G083600--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic010G083600--Sobic009G217500 Sobic006G066200 Sobic006G066200 Sobic010G083600--Sobic006G066200 Sobic003G352400 Sobic003G352400 Sobic010G083600--Sobic003G352400 Sobic003G430400 Sobic003G430400 Sobic010G083600--Sobic003G430400 Sobic007G077100 Sobic007G077100 Sobic010G083600--Sobic007G077100
Octagon: transcription factors


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