Gene annotation
Transcriptome id Sobic.002G202100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QCI7
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11000 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os09g24970.1 : expressed protein
MaizeGDB (Corn) Zm00025a013909 , Zm00025a005860 , Zm00025a049792 , Zm00025a046984
Brachypodium KQJ90244
Barley HORVU5Hr1G065520.1 , HORVU5Hr1G065520.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G202100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G109000 cytochrome P450, putative, expressed -
2 Sobic.002G214800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
3 Sobic.010G209100 WRKY28, expressed -
4 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
6 Sobic.006G194100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
7 Sobic.002G405600 early response to dehydration 15, putative, expressed -
8 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
10 Sobic.009G234000 expressed protein -
11 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
12 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
14 Sobic.009G141500 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659925)@ethylene-responsive transcription factor ERF020, putative, expressed -
15 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
16 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
17 Sobic.002G353400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.002G407100 expressed protein -
19 Sobic.001G489600 expressed protein -
20 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein


Gene co-expression network
sample Sobic002G202100 Sobic002G202100 Sobic005G109000 Sobic005G109000 Sobic002G202100--Sobic005G109000 Sobic002G214800 Sobic002G214800 Sobic002G202100--Sobic002G214800 Sobic010G209100 Sobic010G209100 Sobic002G202100--Sobic010G209100 Sobic001G259600 Sobic001G259600 Sobic002G202100--Sobic001G259600 Sobic001G259700 Sobic001G259700 Sobic002G202100--Sobic001G259700 Sobic006G194100 Sobic006G194100 Sobic002G202100--Sobic006G194100 Sobic002G405600 Sobic002G405600 Sobic002G202100--Sobic002G405600 Sobic007G151100 Sobic007G151100 Sobic002G202100--Sobic007G151100 Sobic006G231100 Sobic006G231100 Sobic002G202100--Sobic006G231100 Sobic005G109000--Sobic010G209100 Sobic005G109000--Sobic002G214800 Sobic005G109000--Sobic002G202100 Sobic005G109000--Sobic007G151100 Sobic002G245800 Sobic002G245800 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic005G109000--Sobic001G259600 Sobic010G083600 Sobic010G083600 Sobic005G109000--Sobic010G083600 Sobic001G449700 Sobic001G449700 Sobic005G109000--Sobic001G449700 Sobic002G214800--Sobic005G109000 Sobic002G214800--Sobic007G151100 Sobic002G214800--Sobic002G202100 Sobic004G186500 Sobic004G186500 Sobic002G214800--Sobic004G186500 Sobic003G082600 Sobic003G082600 Sobic002G214800--Sobic003G082600 Sobic009G069700 Sobic009G069700 Sobic002G214800--Sobic009G069700 Sobic002G374100 Sobic002G374100 Sobic002G214800--Sobic002G374100 Sobic002G214800--Sobic002G245800 Sobic002G214800--Sobic010G083600 Sobic010G209100--Sobic001G259600 Sobic001G341600 Sobic001G341600 Sobic010G209100--Sobic001G341600 Sobic001G077400 Sobic001G077400 Sobic010G209100--Sobic001G077400 Sobic007G077200 Sobic007G077200 Sobic010G209100--Sobic007G077200 Sobic002G036100 Sobic002G036100 Sobic010G209100--Sobic002G036100 Sobic004G280900 Sobic004G280900 Sobic010G209100--Sobic004G280900 Sobic010G209100--Sobic005G109000 Sobic002G140300 Sobic002G140300 Sobic010G209100--Sobic002G140300 Sobic009G217500 Sobic009G217500 Sobic010G209100--Sobic009G217500 Sobic001G259600--Sobic001G259700 Sobic003G313800 Sobic003G313800 Sobic001G259600--Sobic003G313800 Sobic001G259600--Sobic010G209100 Sobic002G282300 Sobic002G282300 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic007G213800 Sobic007G213800 Sobic001G259600--Sobic007G213800 Sobic003G324400 Sobic003G324400 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic005G037000 Sobic005G037000 Sobic001G259600--Sobic005G037000 Sobic001G259700--Sobic006G263600 Sobic009G141500 Sobic009G141500 Sobic001G259700--Sobic009G141500 Sobic001G259700--Sobic001G259600 Sobic002G328400 Sobic002G328400 Sobic001G259700--Sobic002G328400 Sobic001G259700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic001G259700--Sobic004G191400 Sobic001G259700--Sobic001G449700 Sobic001G259700--Sobic002G405600 Sobic001G079300 Sobic001G079300 Sobic001G259700--Sobic001G079300 Sobic006G194100--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic006G194100--Sobic008G177800 Sobic004G286600 Sobic004G286600 Sobic006G194100--Sobic004G286600 Sobic006G230900 Sobic006G230900 Sobic006G194100--Sobic006G230900 Sobic007G057100 Sobic007G057100 Sobic006G194100--Sobic007G057100 Sobic006G194100--Sobic004G280900 Sobic002G294700 Sobic002G294700 Sobic006G194100--Sobic002G294700 Sobic004G257300 Sobic004G257300 Sobic006G194100--Sobic004G257300 Sobic001G205350 Sobic001G205350 Sobic006G194100--Sobic001G205350 Sobic002G405600--Sobic002G245800 Sobic002G405600--Sobic003G324400 Sobic003G202200 Sobic003G202200 Sobic002G405600--Sobic003G202200 Sobic010G204600 Sobic010G204600 Sobic002G405600--Sobic010G204600 Sobic009G247900 Sobic009G247900 Sobic002G405600--Sobic009G247900 Sobic002G405600--Sobic010G267600 Sobic002G405600--Sobic006G263600 Sobic002G405600--Sobic001G259700 Sobic001G095300 Sobic001G095300 Sobic002G405600--Sobic001G095300 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic007G151100--Sobic002G036100 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G231100--Sobic006G231200 Sobic010G217800 Sobic010G217800 Sobic006G231100--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G231100--Sobic002G415600 Sobic010G234600 Sobic010G234600 Sobic006G231100--Sobic010G234600 Sobic006G231100--Sobic004G286600 Sobic006G231100--Sobic002G294700 Sobic006G231100--Sobic002G282300
Octagon: transcription factors


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