Gene annotation
Transcriptome id Sobic.008G025300.1
Synonym Sb08g002210
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
DUF567 domain containing protein, putative, expressed
UniProt Q84YE1
Pfam PF04525
Panther DB PTHR31087:SF5 PTHR31087
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38640 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os12g02720.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029005 , Zm00025a033325 , Zm00025a028729
Brachypodium -
Barley HORVU5Hr1G046200.1 , HORVU4Hr1G024080.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G050350 - -
2 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
3 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
4 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
6 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
7 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
8 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
9 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.002G087500 - -
12 Sobic.005G182701 - -
13 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
14 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
15 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
16 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.006G242800 RIPER9 - Ripening-related family protein precursor, putative, expressed -
18 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
19 Sobic.001G125700 lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
20 Sobic.006G078500 abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic008G025300 Sobic008G025300 Sobic003G050350 Sobic003G050350 Sobic008G025300--Sobic003G050350 Sobic009G014600 Sobic009G014600 Sobic008G025300--Sobic009G014600 Sobic001G056500 Sobic001G056500 Sobic008G025300--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic008G025300--Sobic008G038100 Sobic003G310500 Sobic003G310500 Sobic008G025300--Sobic003G310500 Sobic001G345400 Sobic001G345400 Sobic008G025300--Sobic001G345400 Sobic002G298400 Sobic002G298400 Sobic008G025300--Sobic002G298400 Sobic007G055600 Sobic007G055600 Sobic008G025300--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic008G025300--Sobic007G076000 Sobic002G093600 Sobic002G093600 Sobic003G050350--Sobic002G093600 Sobic001G261750 Sobic001G261750 Sobic003G050350--Sobic001G261750 Sobic008G028533 Sobic008G028533 Sobic003G050350--Sobic008G028533 Sobic002G224300 Sobic002G224300 Sobic003G050350--Sobic002G224300 Sobic002G391700 Sobic002G391700 Sobic003G050350--Sobic002G391700 Sobic009G014600--Sobic007G076000 Sobic009G014600--Sobic007G055600 Sobic002G040400 Sobic002G040400 Sobic009G014600--Sobic002G040400 Sobic006G005500 Sobic006G005500 Sobic009G014600--Sobic006G005500 Sobic008G028600 Sobic008G028600 Sobic009G014600--Sobic008G028600 Sobic001G125700 Sobic001G125700 Sobic009G014600--Sobic001G125700 Sobic002G087500 Sobic002G087500 Sobic009G014600--Sobic002G087500 Sobic005G182701 Sobic005G182701 Sobic009G014600--Sobic005G182701 Sobic005G219000 Sobic005G219000 Sobic009G014600--Sobic005G219000 Sobic001G056500--Sobic009G014600 Sobic001G056500--Sobic005G182701 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic004G217700 Sobic004G217700 Sobic001G056500--Sobic004G217700 Sobic001G056500--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056500--Sobic002G423600 Sobic001G056500--Sobic006G005500 Sobic001G056500--Sobic001G125700 Sobic008G038100--Sobic001G056500 Sobic008G038100--Sobic003G310500 Sobic009G216050 Sobic009G216050 Sobic008G038100--Sobic009G216050 Sobic008G038100--Sobic009G014600 Sobic009G233900 Sobic009G233900 Sobic008G038100--Sobic009G233900 Sobic008G181300 Sobic008G181300 Sobic008G038100--Sobic008G181300 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic006G045000 Sobic006G045000 Sobic008G038100--Sobic006G045000 Sobic003G310500--Sobic001G056500 Sobic003G310500--Sobic008G038100 Sobic004G209500 Sobic004G209500 Sobic003G310500--Sobic004G209500 Sobic010G214200 Sobic010G214200 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic002G216500 Sobic002G216500 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic006G014700 Sobic006G014700 Sobic003G310500--Sobic006G014700 Sobic003G296300 Sobic003G296300 Sobic001G345400--Sobic003G296300 Sobic004G101000 Sobic004G101000 Sobic001G345400--Sobic004G101000 Sobic009G038000 Sobic009G038000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic006G246100 Sobic006G246100 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic009G192100 Sobic009G192100 Sobic001G345400--Sobic009G192100 Sobic001G345400--Sobic008G038100 Sobic002G298400--Sobic002G040400 Sobic002G298400--Sobic002G087500 Sobic002G298400--Sobic002G391700 Sobic002G298400--Sobic008G028600 Sobic002G298400--Sobic002G093600 Sobic008G077800 Sobic008G077800 Sobic002G298400--Sobic008G077800 Sobic004G143801 Sobic004G143801 Sobic002G298400--Sobic004G143801 Sobic008G028566 Sobic008G028566 Sobic002G298400--Sobic008G028566 Sobic002G298400--Sobic005G219000 Sobic007G055600--Sobic005G182701 Sobic007G055600--Sobic007G076000 Sobic007G055600--Sobic006G005500 Sobic007G055600--Sobic001G125700 Sobic007G055600--Sobic009G014600 Sobic007G055600--Sobic001G056400 Sobic007G055600--Sobic002G040400 Sobic007G055600--Sobic008G028600 Sobic009G115400 Sobic009G115400 Sobic007G055600--Sobic009G115400 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic007G076000--Sobic006G005500 Sobic007G076000--Sobic001G125700 Sobic007G076000--Sobic002G040400 Sobic007G076000--Sobic008G028600 Sobic007G076000--Sobic009G014600 Sobic007G076000--Sobic005G219000 Sobic006G007650 Sobic006G007650 Sobic007G076000--Sobic006G007650
Octagon: transcription factors


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