Gene annotation
Transcriptome id Sobic.006G242800.2
Synonym Sb06g030870
Functional annotation RIPER9 - Ripening-related family protein precursor, putative, expressed
UniProt A0A1B6PNF7
Pfam -
Panther DB PTHR33191 PTHR33191:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g42450.1 : RIPER1 - Ripening-related family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G003410.2 , HORVU6Hr1G003410.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G025300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@DUF567 domain containing protein, putative, expressed -
2 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
3 Sobic.001G432600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.010G160033 - -
6 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
7 Sobic.003G050350 - -
8 Sobic.005G161100 expressed protein -
9 Sobic.001G226800 zinc finger family protein, putative, expressed -
10 Sobic.001G357500 amino acid permease family protein, putative, expressed -
11 Sobic.008G127800 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.001G530350 - -
13 Sobic.009G232266 - -
14 Sobic.001G280700 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
15 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.003G296300 WRKY13, expressed -
17 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
18 Sobic.004G333300 serine-rich protein, putative, expressed -
19 Sobic.005G155600 LYK, putative, expressed -
20 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G242800 Sobic006G242800 Sobic008G025300 Sobic008G025300 Sobic006G242800--Sobic008G025300 Sobic001G345400 Sobic001G345400 Sobic006G242800--Sobic001G345400 Sobic001G432600 Sobic001G432600 Sobic006G242800--Sobic001G432600 Sobic001G182600 Sobic001G182600 Sobic006G242800--Sobic001G182600 Sobic010G160033 Sobic010G160033 Sobic006G242800--Sobic010G160033 Sobic009G192100 Sobic009G192100 Sobic006G242800--Sobic009G192100 Sobic003G050350 Sobic003G050350 Sobic006G242800--Sobic003G050350 Sobic005G161100 Sobic005G161100 Sobic006G242800--Sobic005G161100 Sobic001G226800 Sobic001G226800 Sobic006G242800--Sobic001G226800 Sobic008G025300--Sobic003G050350 Sobic009G014600 Sobic009G014600 Sobic008G025300--Sobic009G014600 Sobic001G056500 Sobic001G056500 Sobic008G025300--Sobic001G056500 Sobic008G038100 Sobic008G038100 Sobic008G025300--Sobic008G038100 Sobic003G310500 Sobic003G310500 Sobic008G025300--Sobic003G310500 Sobic008G025300--Sobic001G345400 Sobic002G298400 Sobic002G298400 Sobic008G025300--Sobic002G298400 Sobic007G055600 Sobic007G055600 Sobic008G025300--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic008G025300--Sobic007G076000 Sobic003G296300 Sobic003G296300 Sobic001G345400--Sobic003G296300 Sobic004G101000 Sobic004G101000 Sobic001G345400--Sobic004G101000 Sobic009G038000 Sobic009G038000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic006G246100 Sobic006G246100 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic001G345400--Sobic009G192100 Sobic001G345400--Sobic008G038100 Sobic001G432600--Sobic006G242800 Sobic001G432600--Sobic010G160033 Sobic001G432600--Sobic008G025300 Sobic002G369600 Sobic002G369600 Sobic001G432600--Sobic002G369600 Sobic004G245200 Sobic004G245200 Sobic001G432600--Sobic004G245200 Sobic004G140000 Sobic004G140000 Sobic001G432600--Sobic004G140000 Sobic004G109300 Sobic004G109300 Sobic001G432600--Sobic004G109300 Sobic001G432600--Sobic001G530350 Sobic010G193200 Sobic010G193200 Sobic001G432600--Sobic010G193200 Sobic008G018600 Sobic008G018600 Sobic001G182600--Sobic008G018600 Sobic001G093900 Sobic001G093900 Sobic001G182600--Sobic001G093900 Sobic009G038200 Sobic009G038200 Sobic001G182600--Sobic009G038200 Sobic001G182600--Sobic009G192100 Sobic008G181300 Sobic008G181300 Sobic001G182600--Sobic008G181300 Sobic001G449800 Sobic001G449800 Sobic001G182600--Sobic001G449800 Sobic005G190900 Sobic005G190900 Sobic001G182600--Sobic005G190900 Sobic009G233900 Sobic009G233900 Sobic001G182600--Sobic009G233900 Sobic006G078500 Sobic006G078500 Sobic001G182600--Sobic006G078500 Sobic010G160033--Sobic002G369600 Sobic005G215500 Sobic005G215500 Sobic010G160033--Sobic005G215500 Sobic001G357500 Sobic001G357500 Sobic010G160033--Sobic001G357500 Sobic010G160033--Sobic004G245200 Sobic006G101300 Sobic006G101300 Sobic010G160033--Sobic006G101300 Sobic007G063700 Sobic007G063700 Sobic010G160033--Sobic007G063700 Sobic010G160033--Sobic001G432600 Sobic006G101100 Sobic006G101100 Sobic010G160033--Sobic006G101100 Sobic010G160033--Sobic001G345400 Sobic009G192100--Sobic008G181300 Sobic002G407200 Sobic002G407200 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic009G192100--Sobic008G018600 Sobic009G192100--Sobic001G182600 Sobic009G192100--Sobic008G038100 Sobic009G192100--Sobic001G345400 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic002G093600 Sobic002G093600 Sobic003G050350--Sobic002G093600 Sobic001G261750 Sobic001G261750 Sobic003G050350--Sobic001G261750 Sobic008G028533 Sobic008G028533 Sobic003G050350--Sobic008G028533 Sobic002G224300 Sobic002G224300 Sobic003G050350--Sobic002G224300 Sobic002G391700 Sobic002G391700 Sobic003G050350--Sobic002G391700 Sobic005G161100--Sobic001G093900 Sobic001G024500 Sobic001G024500 Sobic005G161100--Sobic001G024500 Sobic009G025900 Sobic009G025900 Sobic005G161100--Sobic009G025900 Sobic008G113000 Sobic008G113000 Sobic005G161100--Sobic008G113000 Sobic005G161100--Sobic001G182600 Sobic005G161100--Sobic006G246100 Sobic004G010300 Sobic004G010300 Sobic005G161100--Sobic004G010300 Sobic009G065300 Sobic009G065300 Sobic005G161100--Sobic009G065300 Sobic001G403300 Sobic001G403300 Sobic005G161100--Sobic001G403300 Sobic004G095600 Sobic004G095600 Sobic001G226800--Sobic004G095600 Sobic006G131600 Sobic006G131600 Sobic001G226800--Sobic006G131600 Sobic002G373001 Sobic002G373001 Sobic001G226800--Sobic002G373001 Sobic004G302200 Sobic004G302200 Sobic001G226800--Sobic004G302200 Sobic003G110200 Sobic003G110200 Sobic001G226800--Sobic003G110200 Sobic003G102200 Sobic003G102200 Sobic001G226800--Sobic003G102200 Sobic001G449700 Sobic001G449700 Sobic001G226800--Sobic001G449700 Sobic002G092801 Sobic002G092801 Sobic001G226800--Sobic002G092801 Sobic002G034500 Sobic002G034500 Sobic001G226800--Sobic002G034500
Octagon: transcription factors


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