Gene annotation
Transcriptome id Sobic.003G050350.1
Synonym -
Functional annotation -
UniProt A0A1W0VVR3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
2 Sobic.001G261750 - -
3 Sobic.001G261750 - -
4 Sobic.001G261750 - -
5 Sobic.001G261750 - -
6 Sobic.001G261750 - -
7 Sobic.008G028533 - -
8 Sobic.002G224300 no apical meristem protein, putative, expressed -
9 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
10 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
11 Sobic.006G007300 - -
12 Sobic.001G494600 expressed protein -
13 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.002G087500 - -
15 Sobic.008G028566 - -
16 Sobic.008G025300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@DUF567 domain containing protein, putative, expressed -
17 Sobic.004G143801 - -
18 Sobic.008G145200 aspartic proteinase nepenthesin precursor, putative, expressed -
19 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -


Gene co-expression network
sample Sobic003G050350 Sobic003G050350 Sobic002G093600 Sobic002G093600 Sobic003G050350--Sobic002G093600 Sobic001G261750 Sobic001G261750 Sobic003G050350--Sobic001G261750 Sobic008G028533 Sobic008G028533 Sobic003G050350--Sobic008G028533 Sobic002G224300 Sobic002G224300 Sobic003G050350--Sobic002G224300 Sobic002G391700 Sobic002G391700 Sobic003G050350--Sobic002G391700 Sobic002G093600--Sobic002G391700 Sobic008G077800 Sobic008G077800 Sobic002G093600--Sobic008G077800 Sobic002G298400 Sobic002G298400 Sobic002G093600--Sobic002G298400 Sobic002G087500 Sobic002G087500 Sobic002G093600--Sobic002G087500 Sobic006G007300 Sobic006G007300 Sobic002G093600--Sobic006G007300 Sobic008G028566 Sobic008G028566 Sobic002G093600--Sobic008G028566 Sobic002G040400 Sobic002G040400 Sobic002G093600--Sobic002G040400 Sobic008G028600 Sobic008G028600 Sobic002G093600--Sobic008G028600 Sobic004G143801 Sobic004G143801 Sobic002G093600--Sobic004G143801 Sobic001G261750--Sobic001G261750 Sobic001G494600 Sobic001G494600 Sobic001G261750--Sobic001G494600 Sobic001G261750--Sobic002G093600 Sobic001G261750--Sobic008G028533 Sobic008G145200 Sobic008G145200 Sobic001G261750--Sobic008G145200 Sobic001G261750--Sobic006G007300 Sobic008G028533--Sobic001G261750 Sobic008G028533--Sobic002G224300 Sobic008G028533--Sobic002G093600 Sobic008G028533--Sobic008G145200 Sobic008G028533--Sobic006G007300 Sobic002G224300--Sobic008G028533 Sobic002G224300--Sobic006G007300 Sobic002G224300--Sobic008G145200 Sobic002G224300--Sobic008G077800 Sobic002G224300--Sobic008G028566 Sobic002G224300--Sobic002G093600 Sobic002G224300--Sobic002G391700 Sobic002G224300--Sobic001G261750 Sobic002G391700--Sobic002G093600 Sobic002G391700--Sobic002G087500 Sobic002G391700--Sobic002G298400 Sobic002G391700--Sobic002G040400 Sobic002G391700--Sobic008G077800 Sobic002G391700--Sobic008G028600 Sobic002G391700--Sobic006G007300 Sobic002G391700--Sobic008G028566 Sobic005G219000 Sobic005G219000 Sobic002G391700--Sobic005G219000
Octagon: transcription factors


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