Gene annotation
Transcriptome id Sobic.004G006500.2
Synonym Sb04g000770
Functional annotation expressed protein
UniProt A0A1Z5RKA8
Pfam PF05633
Panther DB PTHR31509 PTHR31509:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63930 : from the Czech \'roh\' meaning \'corner\'
RAP-DB (Rice) LOC_Os02g01930.1 : expressed protein
MaizeGDB (Corn) Zm00025a018663
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G185200 VQ domain containing protein, putative, expressed -
2 Sobic.002G418900 expressed protein -
3 Sobic.001G118900 DUF292 domain containing protein, expressed -
4 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
5 Sobic.009G028500 zinc finger family protein, putative, expressed -
6 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
7 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
9 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.010G273700 no apical meristem protein, putative, expressed -
11 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
12 Sobic.001G095750 - -
13 Sobic.007G143400 tetraspanin family protein, putative, expressed -
14 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
15 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
16 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
19 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
20 Sobic.002G341900 - -


Gene co-expression network
sample Sobic004G006500 Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic004G006500--Sobic002G185200 Sobic002G418900 Sobic002G418900 Sobic004G006500--Sobic002G418900 Sobic001G118900 Sobic001G118900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G065900 Sobic004G065900 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic006G114200 Sobic006G114200 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic002G185200--Sobic004G006500 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic002G185200--Sobic004G065900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic007G143400 Sobic007G143400 Sobic002G185200--Sobic007G143400 Sobic002G185200--Sobic006G114200 Sobic002G185200--Sobic004G086800 Sobic002G418900--Sobic004G006500 Sobic002G418900--Sobic002G185200 Sobic002G418900--Sobic001G118900 Sobic002G418900--Sobic004G065900 Sobic002G418900--Sobic009G028500 Sobic002G367900 Sobic002G367900 Sobic002G418900--Sobic002G367900 Sobic002G207300 Sobic002G207300 Sobic002G418900--Sobic002G207300 Sobic002G418900--Sobic007G143400 Sobic001G131200 Sobic001G131200 Sobic002G418900--Sobic001G131200 Sobic001G118900--Sobic004G065900 Sobic001G161200 Sobic001G161200 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic009G010400--Sobic004G086800 Sobic009G010400--Sobic004G065900 Sobic001G064900 Sobic001G064900 Sobic009G010400--Sobic001G064900 Sobic009G100500 Sobic009G100500 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic006G259000 Sobic006G259000 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic009G010400--Sobic010G102000 Sobic009G010400--Sobic004G006500 Sobic009G028500--Sobic004G065900 Sobic009G028500--Sobic004G006500 Sobic010G089700 Sobic010G089700 Sobic009G028500--Sobic010G089700 Sobic009G028500--Sobic002G418900 Sobic009G028500--Sobic002G207300 Sobic009G028500--Sobic002G367900 Sobic009G028500--Sobic001G118900 Sobic009G028500--Sobic009G010400 Sobic009G028500--Sobic002G185200 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic002G195800--Sobic004G006500 Sobic003G376200 Sobic003G376200 Sobic002G195800--Sobic003G376200 Sobic002G195800--Sobic006G114200 Sobic002G195800--Sobic002G185200 Sobic001G450500 Sobic001G450500 Sobic002G195800--Sobic001G450500 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic009G227800 Sobic009G227800 Sobic002G195800--Sobic009G227800 Sobic004G114500 Sobic004G114500 Sobic002G195800--Sobic004G114500 Sobic001G314300 Sobic001G314300 Sobic006G114200--Sobic001G314300 Sobic006G114200--Sobic001G095750 Sobic006G114200--Sobic004G006500 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic006G114200--Sobic001G118900 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic004G086800--Sobic009G010400 Sobic003G416500 Sobic003G416500 Sobic004G086800--Sobic003G416500 Sobic004G086800--Sobic006G259000 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic004G086800--Sobic010G102000 Sobic002G138700 Sobic002G138700 Sobic004G086800--Sobic002G138700 Sobic001G287600 Sobic001G287600 Sobic004G086800--Sobic001G287600
Octagon: transcription factors


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