Gene annotation
Transcriptome id Sobic.006G114200.1
Synonym Sb06g019560
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
heavy metal associated domain containing protein, expressed
UniProt C5YAA4
Pfam -
Panther DB PTHR22814 PTHR22814:SF120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48290 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g39010.1 : heavy metal associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011053 , Zm00025a011056
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.001G095750 - -
3 Sobic.004G006500 expressed protein -
4 Sobic.002G185200 VQ domain containing protein, putative, expressed -
5 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
6 Sobic.001G118900 DUF292 domain containing protein, expressed -
7 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
9 Sobic.006G113800 heavy metal associated domain containing protein, expressed -
10 Sobic.003G291600 receptor-like protein kinase 5 precursor, putative, expressed -
11 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.009G212800 WRKY7, expressed -
13 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
14 Sobic.002G401600 glycosyltransferase, putative, expressed -
15 Sobic.009G028500 zinc finger family protein, putative, expressed -
16 Sobic.003G370400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
17 Sobic.010G273700 no apical meristem protein, putative, expressed -
18 Sobic.003G225900 expressed protein -
19 Sobic.002G418900 expressed protein -
20 Sobic.003G109832 - -


Gene co-expression network
sample Sobic006G114200 Sobic006G114200 Sobic001G314300 Sobic001G314300 Sobic006G114200--Sobic001G314300 Sobic001G095750 Sobic001G095750 Sobic006G114200--Sobic001G095750 Sobic004G006500 Sobic004G006500 Sobic006G114200--Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic001G118900 Sobic001G118900 Sobic006G114200--Sobic001G118900 Sobic002G195800 Sobic002G195800 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic001G314300--Sobic006G114200 Sobic001G314300--Sobic001G095750 Sobic003G109832 Sobic003G109832 Sobic001G314300--Sobic003G109832 Sobic009G227800 Sobic009G227800 Sobic001G314300--Sobic009G227800 Sobic001G314300--Sobic001G314700 Sobic004G092000 Sobic004G092000 Sobic001G314300--Sobic004G092000 Sobic010G273700 Sobic010G273700 Sobic001G314300--Sobic010G273700 Sobic001G314300--Sobic002G185200 Sobic003G339900 Sobic003G339900 Sobic001G314300--Sobic003G339900 Sobic001G095750--Sobic001G118900 Sobic003G131500 Sobic003G131500 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G161200 Sobic001G161200 Sobic001G095750--Sobic001G161200 Sobic004G006500--Sobic002G185200 Sobic002G418900 Sobic002G418900 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G065900 Sobic004G065900 Sobic004G006500--Sobic004G065900 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic002G185200--Sobic004G006500 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic002G185200--Sobic004G065900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic007G143400 Sobic007G143400 Sobic002G185200--Sobic007G143400 Sobic002G185200--Sobic006G114200 Sobic002G185200--Sobic004G086800 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic003G341100 Sobic003G341100 Sobic001G314700--Sobic003G341100 Sobic001G314700--Sobic002G294600 Sobic003G352400 Sobic003G352400 Sobic001G314700--Sobic003G352400 Sobic002G118600 Sobic002G118600 Sobic001G314700--Sobic002G118600 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic002G367900 Sobic002G367900 Sobic001G118900--Sobic002G367900 Sobic002G207300 Sobic002G207300 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G118900--Sobic001G095750 Sobic001G118900--Sobic001G462800 Sobic002G195800--Sobic004G006500 Sobic003G376200 Sobic003G376200 Sobic002G195800--Sobic003G376200 Sobic002G195800--Sobic006G114200 Sobic002G195800--Sobic002G185200 Sobic001G450500 Sobic001G450500 Sobic002G195800--Sobic001G450500 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic002G195800--Sobic009G227800 Sobic004G114500 Sobic004G114500 Sobic002G195800--Sobic004G114500 Sobic001G030600--Sobic001G095750 Sobic001G030600--Sobic004G006500 Sobic001G030600--Sobic006G114200 Sobic001G030600--Sobic001G118900 Sobic001G030600--Sobic002G418900 Sobic007G196400 Sobic007G196400 Sobic001G030600--Sobic007G196400 Sobic004G169900 Sobic004G169900 Sobic001G030600--Sobic004G169900 Sobic001G030600--Sobic010G273700 Sobic001G030600--Sobic007G139900 Sobic006G113800--Sobic006G114200 Sobic006G113800--Sobic001G314300 Sobic001G370600 Sobic001G370600 Sobic006G113800--Sobic001G370600 Sobic006G113800--Sobic004G086800 Sobic006G113800--Sobic001G314700 Sobic006G257700 Sobic006G257700 Sobic006G113800--Sobic006G257700 Sobic001G032300 Sobic001G032300 Sobic006G113800--Sobic001G032300 Sobic007G051800 Sobic007G051800 Sobic006G113800--Sobic007G051800 Sobic003G337800 Sobic003G337800 Sobic006G113800--Sobic003G337800
Octagon: transcription factors


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