Gene annotation
Transcriptome id Sobic.002G216400.1
Synonym Sb02g025840, D501, CYP75B1, TT7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5XDQ4
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G07990 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os09g26960.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a047152 , Zm00025a045061 , Zm00025a014011 , Zm00025a030740
Brachypodium KQJ90411 , KQJ90413
Barley HORVU2Hr1G100050.1 , HORVU2Hr1G100050.2 , HORVU2Hr1G100050.3 , HORVU5Hr1G061340.4 , HORVU5Hr1G061340.1 , HORVU5Hr1G061340.3 , HORVU5Hr1G061340.2 , HORVU5Hr1G061950.1 , HORVU5Hr1G061950.2 , HORVU5Hr1G061950.3 , HORVU5Hr1G061950.4 , HORVU5Hr1G061950.5 , HORVU5Hr1G061950.6 , HORVU5Hr1G061950.7 , HORVU5Hr1G061950.8 , HORVU5Hr1G061930.2 , HORVU5Hr1G061930.3 , HORVU5Hr1G061930.1 , HORVU5Hr1G061930.6 , HORVU5Hr1G061930.4 , HORVU5Hr1G061930.5
Wheat TraesCS5B02G206000 , TraesCS5B02G209200 , TraesCS5D02G217400 , TraesCS5A02G214600 , TraesCS2B02G448700 , TraesCS2A02G428200 , TraesCS2D02G426300 , TraesCS5A02G207700 , TraesCS1B02G067500 , TraesCS5B02G209100 , TraesCS5D02G217200 , TraesCS5D02G217200 , TraesCS5A02G214800
Populus -


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cDNA sequences
Sobic.002G216400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.001G095750 - -
3 Sobic.006G220300 - -
4 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
5 Sobic.003G131500 VQ domain containing protein, putative, expressed -
6 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
7 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
8 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.003G234800 membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.010G272101 - -
11 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
12 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
14 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
15 Sobic.001G118900 DUF292 domain containing protein, expressed -
16 Sobic.002G182800 expressed protein -
17 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
18 Sobic.001G075101 - -
19 Sobic.006G026400 - -
20 Sobic.002G401600 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G216400 Sobic002G216400 Sobic001G110900 Sobic001G110900 Sobic002G216400--Sobic001G110900 Sobic001G095750 Sobic001G095750 Sobic002G216400--Sobic001G095750 Sobic006G220300 Sobic006G220300 Sobic002G216400--Sobic006G220300 Sobic002G013900 Sobic002G013900 Sobic002G216400--Sobic002G013900 Sobic003G131500 Sobic003G131500 Sobic002G216400--Sobic003G131500 Sobic006G114200 Sobic006G114200 Sobic002G216400--Sobic006G114200 Sobic006G203000 Sobic006G203000 Sobic002G216400--Sobic006G203000 Sobic002G110200 Sobic002G110200 Sobic002G216400--Sobic002G110200 Sobic003G234800 Sobic003G234800 Sobic002G216400--Sobic003G234800 Sobic001G110900--Sobic006G220300 Sobic003G272400 Sobic003G272400 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic003G198150 Sobic003G198150 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic001G118900 Sobic001G118900 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic001G095750--Sobic006G114200 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G161200 Sobic001G161200 Sobic001G095750--Sobic001G161200 Sobic006G220200 Sobic006G220200 Sobic006G220300--Sobic006G220200 Sobic006G220300--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220300--Sobic009G155700 Sobic006G220300--Sobic002G216400 Sobic001G087700 Sobic001G087700 Sobic006G220300--Sobic001G087700 Sobic004G332100 Sobic004G332100 Sobic006G220300--Sobic004G332100 Sobic001G470900 Sobic001G470900 Sobic006G220300--Sobic001G470900 Sobic001G045600 Sobic001G045600 Sobic006G220300--Sobic001G045600 Sobic010G260300 Sobic010G260300 Sobic006G220300--Sobic010G260300 Sobic003G233900 Sobic003G233900 Sobic002G013900--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G182800 Sobic002G182800 Sobic002G013900--Sobic002G182800 Sobic002G331450 Sobic002G331450 Sobic002G013900--Sobic002G331450 Sobic003G227600 Sobic003G227600 Sobic002G013900--Sobic003G227600 Sobic010G085400 Sobic010G085400 Sobic002G013900--Sobic010G085400 Sobic003G040800 Sobic003G040800 Sobic002G013900--Sobic003G040800 Sobic001G462800 Sobic001G462800 Sobic003G131500--Sobic001G462800 Sobic010G272101 Sobic010G272101 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic003G131500--Sobic001G081600 Sobic003G131500--Sobic002G182800 Sobic003G131500--Sobic006G203000 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic006G114200--Sobic001G314300 Sobic006G114200--Sobic001G095750 Sobic004G006500 Sobic004G006500 Sobic006G114200--Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic006G114200--Sobic001G118900 Sobic002G195800 Sobic002G195800 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic002G037400 Sobic002G037400 Sobic006G203000--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic006G203000--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic006G203000--Sobic007G169600 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G026400 Sobic006G026400 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic006G203000--Sobic002G110200 Sobic002G110200--Sobic002G331450 Sobic002G110200--Sobic001G075101 Sobic002G110200--Sobic006G203000 Sobic002G110200--Sobic007G169600 Sobic002G110200--Sobic009G128300 Sobic002G110200--Sobic002G182800 Sobic002G110200--Sobic002G013900 Sobic002G110200--Sobic001G509400 Sobic004G170032 Sobic004G170032 Sobic002G110200--Sobic004G170032 Sobic003G234800--Sobic002G189000 Sobic003G234800--Sobic006G203000 Sobic003G234800--Sobic002G182800 Sobic003G234800--Sobic009G128300 Sobic003G234800--Sobic003G227600 Sobic003G234800--Sobic010G085400 Sobic003G234800--Sobic002G110200 Sobic003G234800--Sobic002G331450 Sobic003G234800--Sobic002G013900
Octagon: transcription factors


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