Gene annotation
Transcriptome id Sobic.010G272101.1,Sobic.010G272101.3,Sobic.010G272101.2
Synonym -
Functional annotation -
UniProt A0A1W0VV67 , A0A1W0VV42
Pfam PF03081
Panther DB PTHR12542 PTHR12542:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006887; exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT5G03540 : exocyst subunit exo70 family protein A1
RAP-DB (Rice) LOC_Os09g17810.1 : leucine zipper protein-like, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
2 Sobic.003G131500 VQ domain containing protein, putative, expressed -
3 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
5 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
7 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
8 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
9 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
10 Sobic.003G278700 heavy metal-associated domain containing protein, expressed -
11 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
12 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
13 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
14 Sobic.002G344700 remorin, putative, expressed -
15 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.006G078300 - -
18 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
19 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
20 Sobic.003G141800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic010G272101 Sobic010G272101 Sobic001G081600 Sobic001G081600 Sobic010G272101--Sobic001G081600 Sobic003G131500 Sobic003G131500 Sobic010G272101--Sobic003G131500 Sobic002G217100 Sobic002G217100 Sobic010G272101--Sobic002G217100 Sobic002G068800 Sobic002G068800 Sobic010G272101--Sobic002G068800 Sobic001G063600 Sobic001G063600 Sobic010G272101--Sobic001G063600 Sobic006G032200 Sobic006G032200 Sobic010G272101--Sobic006G032200 Sobic001G050800 Sobic001G050800 Sobic010G272101--Sobic001G050800 Sobic010G016500 Sobic010G016500 Sobic010G272101--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic010G272101--Sobic004G244300 Sobic001G462800 Sobic001G462800 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic004G281200 Sobic004G281200 Sobic001G081600--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400 Sobic003G131500--Sobic001G462800 Sobic003G131500--Sobic010G272101 Sobic001G095750 Sobic001G095750 Sobic003G131500--Sobic001G095750 Sobic003G131500--Sobic010G016500 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic009G128300 Sobic009G128300 Sobic003G131500--Sobic009G128300 Sobic003G131500--Sobic004G244300 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G217100--Sobic002G197600 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic009G167000 Sobic009G167000 Sobic002G217100--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic002G217100--Sobic004G244100 Sobic002G068800--Sobic001G063600 Sobic001G157400 Sobic001G157400 Sobic002G068800--Sobic001G157400 Sobic002G068800--Sobic001G050800 Sobic009G170100 Sobic009G170100 Sobic002G068800--Sobic009G170100 Sobic002G068800--Sobic001G081600 Sobic002G068800--Sobic002G197600 Sobic002G068800--Sobic010G272101 Sobic002G068800--Sobic001G476400 Sobic002G068800--Sobic004G281200 Sobic001G063600--Sobic001G476400 Sobic005G231700 Sobic005G231700 Sobic001G063600--Sobic005G231700 Sobic010G080400 Sobic010G080400 Sobic001G063600--Sobic010G080400 Sobic008G159100 Sobic008G159100 Sobic001G063600--Sobic008G159100 Sobic001G063600--Sobic009G170100 Sobic003G032900 Sobic003G032900 Sobic001G063600--Sobic003G032900 Sobic001G063600--Sobic002G068800 Sobic001G063600--Sobic001G081600 Sobic001G063600--Sobic004G283300 Sobic006G032200--Sobic009G170100 Sobic006G032200--Sobic004G283300 Sobic002G037400 Sobic002G037400 Sobic006G032200--Sobic002G037400 Sobic006G032200--Sobic006G203000 Sobic006G032200--Sobic004G281200 Sobic006G032200--Sobic002G344700 Sobic006G032200--Sobic009G128300 Sobic001G075101 Sobic001G075101 Sobic006G032200--Sobic001G075101 Sobic006G032200--Sobic010G016500 Sobic001G050800--Sobic001G157400 Sobic001G050800--Sobic009G170100 Sobic006G194600 Sobic006G194600 Sobic001G050800--Sobic006G194600 Sobic006G026400 Sobic006G026400 Sobic001G050800--Sobic006G026400 Sobic001G050800--Sobic006G032200 Sobic001G050800--Sobic004G281200 Sobic001G050800--Sobic004G244300 Sobic001G050800--Sobic004G244100 Sobic001G050800--Sobic002G068800 Sobic010G016500--Sobic004G281200 Sobic010G016500--Sobic004G244300 Sobic010G016500--Sobic006G194600 Sobic010G016500--Sobic006G203000 Sobic010G016500--Sobic004G283300 Sobic010G016500--Sobic002G217100 Sobic010G016500--Sobic004G244100 Sobic010G016500--Sobic001G081600 Sobic010G016500--Sobic002G182800 Sobic004G244300--Sobic004G281200 Sobic004G244300--Sobic006G194600 Sobic004G244300--Sobic010G016500 Sobic004G244300--Sobic006G203000 Sobic004G244300--Sobic004G244100 Sobic004G244300--Sobic009G167000 Sobic004G244300--Sobic002G217100 Sobic004G244300--Sobic002G037400 Sobic004G244300--Sobic001G075101
Octagon: transcription factors


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