Gene annotation
Transcriptome id Sobic.004G176900.2,Sobic.004G176900.3
Synonym MAP3KA, Sb04g022690, MAPKKK3
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1Z5RN71 , A0A1Z5RP28
Pfam PF00069
Panther DB PTHR24361:SF381 PTHR24361
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT5G66850 : mitogen-activated protein kinase kinase kinase 3,mitogen-activated protein kinase kinase kinase 5
RAP-DB (Rice) LOC_Os02g35010.1 : STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a032251 , Zm00025a020648 , Zm00025a020644 , Zm00025a056101
Brachypodium KQJ99880
Barley HORVU6Hr1G064150.1 , HORVU6Hr1G064150.4 , HORVU6Hr1G064150.8 , HORVU6Hr1G064150.20 , HORVU6Hr1G064150.2 , HORVU6Hr1G064150.6 , HORVU6Hr1G064150.7 , HORVU6Hr1G064150.9 , HORVU6Hr1G064150.18 , HORVU6Hr1G064150.19 , HORVU6Hr1G064150.12 , HORVU6Hr1G064150.13 , HORVU6Hr1G064150.10 , HORVU6Hr1G064150.11 , HORVU6Hr1G064150.14 , HORVU6Hr1G064150.15
Wheat TraesCS6D02G227300 , TraesCS6D02G227300 , TraesCS6D02G227300 , TraesCS6A02G245000 , TraesCS6A02G245000 , TraesCS6A02G245000 , TraesCS6B02G279300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G068900 WRKY67, expressed -
2 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
3 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.009G167000 expressed protein -
5 Sobic.009G212800 WRKY7, expressed -
6 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
8 Sobic.008G058900 amino acid transporter, putative, expressed -
9 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
10 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
11 Sobic.009G076500 expressed protein -
12 Sobic.006G026400 - -
13 Sobic.010G238400 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
14 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
15 Sobic.009G076700 expressed protein -
16 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
17 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
20 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic004G176900 Sobic004G176900 Sobic009G068900 Sobic009G068900 Sobic004G176900--Sobic009G068900 Sobic004G244100 Sobic004G244100 Sobic004G176900--Sobic004G244100 Sobic002G197600 Sobic002G197600 Sobic004G176900--Sobic002G197600 Sobic009G167000 Sobic009G167000 Sobic004G176900--Sobic009G167000 Sobic009G212800 Sobic009G212800 Sobic004G176900--Sobic009G212800 Sobic006G203000 Sobic006G203000 Sobic004G176900--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic004G176900--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic004G176900--Sobic008G058900 Sobic002G367900 Sobic002G367900 Sobic004G176900--Sobic002G367900 Sobic009G068900--Sobic009G212800 Sobic009G068900--Sobic004G176900 Sobic007G073750 Sobic007G073750 Sobic009G068900--Sobic007G073750 Sobic009G076700 Sobic009G076700 Sobic009G068900--Sobic009G076700 Sobic010G253500 Sobic010G253500 Sobic009G068900--Sobic010G253500 Sobic003G397400 Sobic003G397400 Sobic009G068900--Sobic003G397400 Sobic005G016900 Sobic005G016900 Sobic009G068900--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic009G068900--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic009G068900--Sobic007G143200 Sobic003G268900 Sobic003G268900 Sobic004G244100--Sobic003G268900 Sobic006G194600 Sobic006G194600 Sobic004G244100--Sobic006G194600 Sobic004G244300 Sobic004G244300 Sobic004G244100--Sobic004G244300 Sobic004G281200 Sobic004G281200 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic010G016500 Sobic010G016500 Sobic004G244100--Sobic010G016500 Sobic002G217100 Sobic002G217100 Sobic004G244100--Sobic002G217100 Sobic004G244100--Sobic006G203000 Sobic006G026400 Sobic006G026400 Sobic004G244100--Sobic006G026400 Sobic001G081600 Sobic001G081600 Sobic002G197600--Sobic001G081600 Sobic002G197600--Sobic002G217100 Sobic001G462800 Sobic001G462800 Sobic002G197600--Sobic001G462800 Sobic002G197600--Sobic004G281200 Sobic006G210300 Sobic006G210300 Sobic002G197600--Sobic006G210300 Sobic002G197600--Sobic002G367900 Sobic008G036000 Sobic008G036000 Sobic002G197600--Sobic008G036000 Sobic002G197600--Sobic004G244100 Sobic002G197600--Sobic004G176900 Sobic002G021300 Sobic002G021300 Sobic009G167000--Sobic002G021300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G076500 Sobic009G076500 Sobic009G167000--Sobic009G076500 Sobic009G167000--Sobic008G058900 Sobic008G059000 Sobic008G059000 Sobic009G167000--Sobic008G059000 Sobic009G212800--Sobic009G068900 Sobic009G212800--Sobic004G176900 Sobic009G212800--Sobic002G367900 Sobic003G146000 Sobic003G146000 Sobic009G212800--Sobic003G146000 Sobic003G291600 Sobic003G291600 Sobic009G212800--Sobic003G291600 Sobic009G212800--Sobic004G244100 Sobic009G212800--Sobic006G203000 Sobic009G064400 Sobic009G064400 Sobic009G212800--Sobic009G064400 Sobic009G212800--Sobic003G268900 Sobic006G203000--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic006G203000--Sobic001G075101 Sobic007G169600 Sobic007G169600 Sobic006G203000--Sobic007G169600 Sobic002G331450 Sobic002G331450 Sobic006G203000--Sobic002G331450 Sobic003G083000 Sobic003G083000 Sobic006G203000--Sobic003G083000 Sobic002G325600 Sobic002G325600 Sobic006G203000--Sobic002G325600 Sobic006G203000--Sobic006G026400 Sobic002G023900 Sobic002G023900 Sobic006G203000--Sobic002G023900 Sobic002G110200 Sobic002G110200 Sobic006G203000--Sobic002G110200 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic002G037400--Sobic006G026400 Sobic002G037400--Sobic009G076700 Sobic002G037400--Sobic007G143100 Sobic002G037400--Sobic005G016900 Sobic008G058900--Sobic008G059000 Sobic008G058900--Sobic009G167000 Sobic010G201200 Sobic010G201200 Sobic008G058900--Sobic010G201200 Sobic008G058900--Sobic009G076500 Sobic008G058900--Sobic009G076700 Sobic008G058900--Sobic004G244100 Sobic008G058900--Sobic002G021300 Sobic008G058900--Sobic009G068900 Sobic008G058900--Sobic007G073750 Sobic002G207300 Sobic002G207300 Sobic002G367900--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic002G367900--Sobic004G065900 Sobic002G367900--Sobic003G268900 Sobic001G095700 Sobic001G095700 Sobic002G367900--Sobic001G095700 Sobic002G367900--Sobic001G462800 Sobic002G294600 Sobic002G294600 Sobic002G367900--Sobic002G294600 Sobic002G367900--Sobic002G197600 Sobic002G367900--Sobic006G210300 Sobic002G367900--Sobic004G244100
Octagon: transcription factors


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