Gene annotation
Transcriptome id Sobic.006G113800.1
Synonym Sb06g019520
Functional annotation heavy metal associated domain containing protein, expressed
UniProt C5YAA0
Pfam -
Panther DB PTHR22814 PTHR22814:SF120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48290 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os04g39010.1 : heavy metal associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011058 , Zm00025a011059
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
2 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.001G370600 expressed protein -
4 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
6 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
7 Sobic.001G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
8 Sobic.007G051800 down-regulated TF in developmental senescence(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
9 Sobic.003G337800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY108, expressed -
10 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
11 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
12 Sobic.001G339200 - -
13 Sobic.002G185200 VQ domain containing protein, putative, expressed -
14 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
15 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
16 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
18 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
19 Sobic.001G489600 expressed protein -
20 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G113800 Sobic006G113800 Sobic006G114200 Sobic006G114200 Sobic006G113800--Sobic006G114200 Sobic001G314300 Sobic001G314300 Sobic006G113800--Sobic001G314300 Sobic001G370600 Sobic001G370600 Sobic006G113800--Sobic001G370600 Sobic004G086800 Sobic004G086800 Sobic006G113800--Sobic004G086800 Sobic001G314700 Sobic001G314700 Sobic006G113800--Sobic001G314700 Sobic006G257700 Sobic006G257700 Sobic006G113800--Sobic006G257700 Sobic001G032300 Sobic001G032300 Sobic006G113800--Sobic001G032300 Sobic007G051800 Sobic007G051800 Sobic006G113800--Sobic007G051800 Sobic003G337800 Sobic003G337800 Sobic006G113800--Sobic003G337800 Sobic006G114200--Sobic001G314300 Sobic001G095750 Sobic001G095750 Sobic006G114200--Sobic001G095750 Sobic004G006500 Sobic004G006500 Sobic006G114200--Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic006G114200--Sobic002G185200 Sobic006G114200--Sobic001G314700 Sobic001G118900 Sobic001G118900 Sobic006G114200--Sobic001G118900 Sobic002G195800 Sobic002G195800 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G114200--Sobic006G113800 Sobic001G314300--Sobic006G114200 Sobic001G314300--Sobic001G095750 Sobic003G109832 Sobic003G109832 Sobic001G314300--Sobic003G109832 Sobic009G227800 Sobic009G227800 Sobic001G314300--Sobic009G227800 Sobic001G314300--Sobic001G314700 Sobic004G092000 Sobic004G092000 Sobic001G314300--Sobic004G092000 Sobic010G273700 Sobic010G273700 Sobic001G314300--Sobic010G273700 Sobic001G314300--Sobic002G185200 Sobic003G339900 Sobic003G339900 Sobic001G314300--Sobic003G339900 Sobic006G273800 Sobic006G273800 Sobic001G370600--Sobic006G273800 Sobic002G197600 Sobic002G197600 Sobic001G370600--Sobic002G197600 Sobic001G370600--Sobic007G051800 Sobic002G367900 Sobic002G367900 Sobic001G370600--Sobic002G367900 Sobic003G425200 Sobic003G425200 Sobic001G370600--Sobic003G425200 Sobic006G210300 Sobic006G210300 Sobic001G370600--Sobic006G210300 Sobic003G341100 Sobic003G341100 Sobic001G370600--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G370600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G370600--Sobic007G201100 Sobic009G010400 Sobic009G010400 Sobic004G086800--Sobic009G010400 Sobic003G416500 Sobic003G416500 Sobic004G086800--Sobic003G416500 Sobic006G259000 Sobic006G259000 Sobic004G086800--Sobic006G259000 Sobic004G065900 Sobic004G065900 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic010G102000 Sobic010G102000 Sobic004G086800--Sobic010G102000 Sobic002G138700 Sobic002G138700 Sobic004G086800--Sobic002G138700 Sobic001G287600 Sobic001G287600 Sobic004G086800--Sobic001G287600 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic006G146500 Sobic006G146500 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic001G314700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G314700--Sobic002G294600 Sobic003G352400 Sobic003G352400 Sobic001G314700--Sobic003G352400 Sobic002G118600 Sobic002G118600 Sobic001G314700--Sobic002G118600 Sobic001G064900 Sobic001G064900 Sobic006G257700--Sobic001G064900 Sobic006G257700--Sobic009G010400 Sobic006G257700--Sobic010G102000 Sobic004G297600 Sobic004G297600 Sobic006G257700--Sobic004G297600 Sobic001G095700 Sobic001G095700 Sobic006G257700--Sobic001G095700 Sobic006G257700--Sobic001G287600 Sobic010G023200 Sobic010G023200 Sobic006G257700--Sobic010G023200 Sobic007G077300 Sobic007G077300 Sobic006G257700--Sobic007G077300 Sobic006G257700--Sobic006G259000 Sobic001G032300--Sobic002G185200 Sobic001G032300--Sobic001G095750 Sobic003G131500 Sobic003G131500 Sobic001G032300--Sobic003G131500 Sobic007G143400 Sobic007G143400 Sobic001G032300--Sobic007G143400 Sobic001G032300--Sobic004G006500 Sobic005G087800 Sobic005G087800 Sobic001G032300--Sobic005G087800 Sobic002G427400 Sobic002G427400 Sobic001G032300--Sobic002G427400 Sobic001G032300--Sobic003G109832 Sobic003G078501 Sobic003G078501 Sobic001G032300--Sobic003G078501 Sobic007G051800--Sobic001G095700 Sobic007G051800--Sobic001G370600 Sobic007G051800--Sobic001G462800 Sobic007G051800--Sobic002G367900 Sobic003G268900 Sobic003G268900 Sobic007G051800--Sobic003G268900 Sobic007G051800--Sobic006G273800 Sobic007G051800--Sobic002G197600 Sobic007G051800--Sobic006G210300 Sobic007G051800--Sobic004G065900 Sobic001G051600 Sobic001G051600 Sobic003G337800--Sobic001G051600 Sobic001G216300 Sobic001G216300 Sobic003G337800--Sobic001G216300 Sobic010G052600 Sobic010G052600 Sobic003G337800--Sobic010G052600 Sobic001G489600 Sobic001G489600 Sobic003G337800--Sobic001G489600 Sobic003G337800--Sobic002G185200 Sobic003G225900 Sobic003G225900 Sobic003G337800--Sobic003G225900 Sobic003G337800--Sobic003G352400 Sobic003G337800--Sobic002G427400 Sobic006G095600 Sobic006G095600 Sobic003G337800--Sobic006G095600
Octagon: transcription factors


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