Gene annotation
Transcriptome id Sobic.001G032300.1
Synonym RLK, Sb01g003020
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
lectin-like receptor kinase, putative, expressed
UniProt A0A1B6QH61
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF2
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os03g60810.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a056576 , Zm00025a008835 , Zm00025a008837
Brachypodium -
Barley HORVU5Hr1G114030.1 , HORVU5Hr1G114030.4 , HORVU5Hr1G114030.2 , HORVU5Hr1G114030.3 , HORVU2Hr1G091360.3 , HORVU2Hr1G091360.2 , HORVU2Hr1G091360.1 , HORVU7Hr1G000530.1 , HORVU5Hr1G114100.1
Wheat TraesCS5A02G484600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G185200 VQ domain containing protein, putative, expressed -
2 Sobic.001G095750 - -
3 Sobic.003G131500 VQ domain containing protein, putative, expressed -
4 Sobic.007G143400 tetraspanin family protein, putative, expressed -
5 Sobic.004G006500 expressed protein -
6 Sobic.005G087800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.002G427400 COBRA-like protein 7 precursor, putative, expressed -
8 Sobic.003G109832 - -
9 Sobic.003G078501 - -
10 Sobic.003G225900 expressed protein -
11 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
12 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
13 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
14 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G337500 GATA zinc finger domain containing protein, expressed -
16 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
17 Sobic.004G283201 - -
18 Sobic.007G051800 down-regulated TF in developmental senescence(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
19 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
20 Sobic.010G272101 - -


Gene co-expression network
sample Sobic001G032300 Sobic001G032300 Sobic002G185200 Sobic002G185200 Sobic001G032300--Sobic002G185200 Sobic001G095750 Sobic001G095750 Sobic001G032300--Sobic001G095750 Sobic003G131500 Sobic003G131500 Sobic001G032300--Sobic003G131500 Sobic007G143400 Sobic007G143400 Sobic001G032300--Sobic007G143400 Sobic004G006500 Sobic004G006500 Sobic001G032300--Sobic004G006500 Sobic005G087800 Sobic005G087800 Sobic001G032300--Sobic005G087800 Sobic002G427400 Sobic002G427400 Sobic001G032300--Sobic002G427400 Sobic003G109832 Sobic003G109832 Sobic001G032300--Sobic003G109832 Sobic003G078501 Sobic003G078501 Sobic001G032300--Sobic003G078501 Sobic002G185200--Sobic004G006500 Sobic002G418900 Sobic002G418900 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic004G065900 Sobic004G065900 Sobic002G185200--Sobic004G065900 Sobic001G118900 Sobic001G118900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic002G185200--Sobic007G143400 Sobic006G114200 Sobic006G114200 Sobic002G185200--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic002G185200--Sobic004G086800 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic001G095750--Sobic005G087800 Sobic001G161200 Sobic001G161200 Sobic001G095750--Sobic001G161200 Sobic001G462800 Sobic001G462800 Sobic003G131500--Sobic001G462800 Sobic010G272101 Sobic010G272101 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic009G128300 Sobic009G128300 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic002G341900 Sobic002G341900 Sobic007G143400--Sobic002G341900 Sobic001G095700 Sobic001G095700 Sobic007G143400--Sobic001G095700 Sobic007G143400--Sobic002G294600 Sobic002G217100 Sobic002G217100 Sobic007G143400--Sobic002G217100 Sobic007G143400--Sobic001G462800 Sobic003G268900 Sobic003G268900 Sobic007G143400--Sobic003G268900 Sobic002G367900 Sobic002G367900 Sobic007G143400--Sobic002G367900 Sobic006G210300 Sobic006G210300 Sobic007G143400--Sobic006G210300 Sobic007G143400--Sobic004G065900 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G006500--Sobic004G086800 Sobic003G233900 Sobic003G233900 Sobic005G087800--Sobic003G233900 Sobic004G285100 Sobic004G285100 Sobic005G087800--Sobic004G285100 Sobic005G087800--Sobic002G182800 Sobic005G087800--Sobic002G189000 Sobic004G283300 Sobic004G283300 Sobic005G087800--Sobic004G283300 Sobic004G310600 Sobic004G310600 Sobic005G087800--Sobic004G310600 Sobic003G227600 Sobic003G227600 Sobic005G087800--Sobic003G227600 Sobic005G087800--Sobic009G128300 Sobic009G000700 Sobic009G000700 Sobic005G087800--Sobic009G000700 Sobic007G166900 Sobic007G166900 Sobic002G427400--Sobic007G166900 Sobic001G080300 Sobic001G080300 Sobic002G427400--Sobic001G080300 Sobic008G159100 Sobic008G159100 Sobic002G427400--Sobic008G159100 Sobic004G278200 Sobic004G278200 Sobic002G427400--Sobic004G278200 Sobic003G373150 Sobic003G373150 Sobic002G427400--Sobic003G373150 Sobic010G006700 Sobic010G006700 Sobic002G427400--Sobic010G006700 Sobic003G225900 Sobic003G225900 Sobic002G427400--Sobic003G225900 Sobic003G032900 Sobic003G032900 Sobic002G427400--Sobic003G032900 Sobic006G267900 Sobic006G267900 Sobic002G427400--Sobic006G267900 Sobic010G273700 Sobic010G273700 Sobic003G109832--Sobic010G273700 Sobic003G109832--Sobic001G314300 Sobic009G227800 Sobic009G227800 Sobic003G109832--Sobic009G227800 Sobic003G109832--Sobic001G095750 Sobic003G109832--Sobic004G006500 Sobic003G370400 Sobic003G370400 Sobic003G109832--Sobic003G370400 Sobic003G423200 Sobic003G423200 Sobic003G109832--Sobic003G423200 Sobic003G109832--Sobic002G137800 Sobic003G109832--Sobic002G185200 Sobic003G078501--Sobic004G310600 Sobic003G078501--Sobic009G000700 Sobic003G078501--Sobic010G006700 Sobic001G125100 Sobic001G125100 Sobic003G078501--Sobic001G125100 Sobic001G159850 Sobic001G159850 Sobic003G078501--Sobic001G159850
Octagon: transcription factors


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