Gene annotation
Transcriptome id Sobic.001G314700.2,Sobic.001G314700.3,Sobic.001G314700.1,Sobic.001G314700.4
Synonym Sb01g030600
Functional annotation uncharacterized Cys-rich domain containing protein, putative, expressed
UniProt A0A1Z5S8H0 , C5WUF0
Pfam -
Panther DB PTHR31152 PTHR31152 PTHR31152:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63830 : PLAC8 family protein
RAP-DB (Rice) LOC_Os10g39100.1 : uncharacterized Cys-rich domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052243 , Zm00025a053499
Brachypodium KQJ97589
Barley HORVU1Hr1G051580.4 , HORVU1Hr1G051580.5 , HORVU1Hr1G051580.6 , HORVU1Hr1G051580.7 , HORVU1Hr1G051580.1 , HORVU1Hr1G051580.2 , HORVU1Hr1G051580.3 , HORVU1Hr1G051580.8 , HORVU1Hr1G051580.9 , HORVU1Hr1G051580.23 , HORVU1Hr1G051580.22 , HORVU1Hr1G051580.21 , HORVU1Hr1G051580.20 , HORVU1Hr1G051580.16 , HORVU1Hr1G051580.17 , HORVU1Hr1G051580.14 , HORVU1Hr1G051580.15 , HORVU1Hr1G051580.12 , HORVU1Hr1G051580.13 , HORVU1Hr1G051580.10 , HORVU1Hr1G051580.11 , HORVU1Hr1G051580.18 , HORVU1Hr1G051580.19
Wheat TraesCS1A02G199200 , TraesCS1A02G199200 , TraesCS1D02G203000 , TraesCS1D02G203000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G145700 expressed protein -
2 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
4 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
5 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
6 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
7 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
9 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
10 Sobic.003G263100 Protein kinase domain containing protein, expressed -
11 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
13 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
14 Sobic.003G425200 Calmodulin-like protein 1(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
15 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
17 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
18 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
19 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
20 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -


Gene co-expression network
sample Sobic001G314700 Sobic001G314700 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic006G146500 Sobic006G146500 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic003G341100 Sobic003G341100 Sobic001G314700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G314700--Sobic002G294600 Sobic003G352400 Sobic003G352400 Sobic001G314700--Sobic003G352400 Sobic002G118600 Sobic002G118600 Sobic001G314700--Sobic002G118600 Sobic007G145700--Sobic003G341100 Sobic007G145700--Sobic002G294600 Sobic010G102000 Sobic010G102000 Sobic007G145700--Sobic010G102000 Sobic007G145700--Sobic001G462800 Sobic007G145700--Sobic006G146500 Sobic009G217500 Sobic009G217500 Sobic007G145700--Sobic009G217500 Sobic001G095700 Sobic001G095700 Sobic007G145700--Sobic001G095700 Sobic009G044400 Sobic009G044400 Sobic007G145700--Sobic009G044400 Sobic006G273800 Sobic006G273800 Sobic007G145700--Sobic006G273800 Sobic004G025000--Sobic001G081600 Sobic002G379400 Sobic002G379400 Sobic004G025000--Sobic002G379400 Sobic006G095600 Sobic006G095600 Sobic004G025000--Sobic006G095600 Sobic002G344700 Sobic002G344700 Sobic004G025000--Sobic002G344700 Sobic002G330300 Sobic002G330300 Sobic004G025000--Sobic002G330300 Sobic001G476400 Sobic001G476400 Sobic004G025000--Sobic001G476400 Sobic001G063600 Sobic001G063600 Sobic004G025000--Sobic001G063600 Sobic004G025000--Sobic001G314700 Sobic010G076700 Sobic010G076700 Sobic004G025000--Sobic010G076700 Sobic001G081600--Sobic001G462800 Sobic002G217100 Sobic002G217100 Sobic001G081600--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic004G281200 Sobic004G281200 Sobic001G081600--Sobic004G281200 Sobic001G081600--Sobic002G344700 Sobic001G081600--Sobic004G025000 Sobic001G081600--Sobic001G476400 Sobic003G425200 Sobic003G425200 Sobic006G146500--Sobic003G425200 Sobic004G065900 Sobic004G065900 Sobic006G146500--Sobic004G065900 Sobic006G146500--Sobic007G145700 Sobic006G146500--Sobic003G341100 Sobic002G207300 Sobic002G207300 Sobic006G146500--Sobic002G207300 Sobic006G146500--Sobic002G294600 Sobic007G201100 Sobic007G201100 Sobic006G146500--Sobic007G201100 Sobic002G367900 Sobic002G367900 Sobic006G146500--Sobic002G367900 Sobic006G146500--Sobic001G081600 Sobic001G462800--Sobic001G081600 Sobic001G462800--Sobic002G217100 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic001G462800--Sobic002G344700 Sobic001G462800--Sobic002G367900 Sobic001G462800--Sobic006G210300 Sobic001G462800--Sobic007G145700 Sobic001G462800--Sobic004G281200 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic007G077100 Sobic007G077100 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic002G294600--Sobic007G145700 Sobic002G294600--Sobic001G462800 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic002G294600--Sobic004G065900 Sobic002G294600--Sobic002G217100 Sobic002G294600--Sobic003G341100 Sobic002G294600--Sobic006G146500 Sobic001G118900 Sobic001G118900 Sobic002G294600--Sobic001G118900 Sobic003G352400--Sobic003G341100 Sobic003G352400--Sobic002G118600 Sobic010G083600 Sobic010G083600 Sobic003G352400--Sobic010G083600 Sobic007G090300 Sobic007G090300 Sobic003G352400--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic003G352400--Sobic005G109000 Sobic003G352400--Sobic010G102000 Sobic003G352400--Sobic001G341600 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic002G118600--Sobic001G341600 Sobic002G118600--Sobic003G341100 Sobic010G228000 Sobic010G228000 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic001G290400 Sobic001G290400 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300
Octagon: transcription factors


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