Gene annotation
Transcriptome id Sobic.002G137800.1
Synonym Sb02g012470
Functional annotation gibberellin 20 oxidase 2, putative, expressed
UniProt C5X6L0
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF207
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G36690 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os08g44590.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a030539 , Zm00025a005590
Brachypodium KQJ99390 , KQJ91631
Barley HORVU4Hr1G000050.5 , HORVU4Hr1G000050.4 , HORVU4Hr1G000050.7 , HORVU4Hr1G000050.1 , HORVU4Hr1G000050.3 , HORVU4Hr1G000050.2 , HORVU4Hr1G000050.8 , HORVU4Hr1G000050.11 , HORVU4Hr1G000050.10 , HORVU4Hr1G000050.12
Wheat TraesCS4B02G003300 , TraesCS4A02G311000 , TraesCS7B02G180300 , TraesCS4D02G002800 , TraesCS7A02G280900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G095750 - -
2 Sobic.001G118900 DUF292 domain containing protein, expressed -
3 Sobic.004G340800 OsFBX70 - F-box domain containing protein, expressed -
4 Sobic.001G351100 LOL3, putative, expressed -
5 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.003G109832 - -
8 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
9 Sobic.009G028500 zinc finger family protein, putative, expressed -
10 Sobic.003G423300 RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.004G006500 expressed protein -
12 Sobic.010G273700 no apical meristem protein, putative, expressed -
13 Sobic.007G181701 - -
14 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
15 Sobic.003G423200 NAM, putative, expressed -
16 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -
17 Sobic.004G092000 expressed protein -
18 Sobic.006G220300 - -
19 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.003G131500 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G137800 Sobic002G137800 Sobic001G095750 Sobic001G095750 Sobic002G137800--Sobic001G095750 Sobic001G118900 Sobic001G118900 Sobic002G137800--Sobic001G118900 Sobic004G340800 Sobic004G340800 Sobic002G137800--Sobic004G340800 Sobic001G351100 Sobic001G351100 Sobic002G137800--Sobic001G351100 Sobic006G205200 Sobic006G205200 Sobic002G137800--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic003G138400 Sobic003G138400 Sobic002G137800--Sobic003G138400 Sobic009G028500 Sobic009G028500 Sobic002G137800--Sobic009G028500 Sobic001G095750--Sobic001G118900 Sobic003G131500 Sobic003G131500 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic001G095750--Sobic002G137800 Sobic006G114200 Sobic006G114200 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic004G065900 Sobic004G065900 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic002G367900 Sobic002G367900 Sobic001G118900--Sobic002G367900 Sobic002G207300 Sobic002G207300 Sobic001G118900--Sobic002G207300 Sobic004G006500 Sobic004G006500 Sobic001G118900--Sobic004G006500 Sobic002G294600 Sobic002G294600 Sobic001G118900--Sobic002G294600 Sobic002G418900 Sobic002G418900 Sobic001G118900--Sobic002G418900 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic004G340800--Sobic002G137800 Sobic003G403500 Sobic003G403500 Sobic004G340800--Sobic003G403500 Sobic004G340800--Sobic001G351100 Sobic005G072200 Sobic005G072200 Sobic004G340800--Sobic005G072200 Sobic004G092000 Sobic004G092000 Sobic004G340800--Sobic004G092000 Sobic002G073900 Sobic002G073900 Sobic004G340800--Sobic002G073900 Sobic010G199900 Sobic010G199900 Sobic004G340800--Sobic010G199900 Sobic001G414000 Sobic001G414000 Sobic004G340800--Sobic001G414000 Sobic005G045200 Sobic005G045200 Sobic004G340800--Sobic005G045200 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic006G042200 Sobic006G042200 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic001G351100--Sobic004G340800 Sobic001G351100--Sobic002G137800 Sobic001G351100--Sobic002G073900 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100 Sobic006G205200--Sobic001G161200 Sobic006G205200--Sobic001G118900 Sobic001G216300 Sobic001G216300 Sobic006G205200--Sobic001G216300 Sobic007G181701 Sobic007G181701 Sobic006G205200--Sobic007G181701 Sobic001G436000 Sobic001G436000 Sobic006G205200--Sobic001G436000 Sobic006G205200--Sobic001G095750 Sobic006G205200--Sobic003G131500 Sobic007G169200 Sobic007G169200 Sobic006G205200--Sobic007G169200 Sobic001G314700 Sobic001G314700 Sobic006G205200--Sobic001G314700 Sobic001G161200--Sobic001G118900 Sobic001G161200--Sobic006G205200 Sobic001G161200--Sobic002G207300 Sobic001G161200--Sobic004G065900 Sobic001G161200--Sobic003G131500 Sobic001G161200--Sobic001G095750 Sobic001G161200--Sobic001G216300 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic010G273700 Sobic010G273700 Sobic003G109832--Sobic010G273700 Sobic003G109832--Sobic001G314300 Sobic009G227800 Sobic009G227800 Sobic003G109832--Sobic009G227800 Sobic003G109832--Sobic001G095750 Sobic003G109832--Sobic004G006500 Sobic003G370400 Sobic003G370400 Sobic003G109832--Sobic003G370400 Sobic003G423200 Sobic003G423200 Sobic003G109832--Sobic003G423200 Sobic003G109832--Sobic002G137800 Sobic002G185200 Sobic002G185200 Sobic003G109832--Sobic002G185200 Sobic003G138400--Sobic010G273700 Sobic004G220600 Sobic004G220600 Sobic003G138400--Sobic004G220600 Sobic003G138400--Sobic004G006500 Sobic001G339600 Sobic001G339600 Sobic003G138400--Sobic001G339600 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic003G138400--Sobic004G092000 Sobic002G216500 Sobic002G216500 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic009G028500--Sobic004G065900 Sobic009G028500--Sobic004G006500 Sobic010G089700 Sobic010G089700 Sobic009G028500--Sobic010G089700 Sobic009G028500--Sobic002G418900 Sobic009G028500--Sobic002G207300 Sobic009G028500--Sobic002G367900 Sobic009G028500--Sobic001G118900 Sobic009G028500--Sobic009G010400 Sobic009G028500--Sobic002G185200
Octagon: transcription factors


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