Gene annotation
Transcriptome id Sobic.004G340800.2
Synonym AtPP2-B10, PP2-B10, Sb04g036830
Functional annotation OsFBX70 - F-box domain containing protein, expressed
UniProt A0A1Z5RQT8
Pfam PF14299
Panther DB PTHR32278 PTHR32278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02360 : phloem protein 2-B10
RAP-DB (Rice) LOC_Os02g56840.1 : OsFBX70 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022559
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
2 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
3 Sobic.001G351100 LOL3, putative, expressed -
4 Sobic.005G072200 lipase, putative, expressed -
5 Sobic.004G092000 expressed protein -
6 Sobic.002G073900 expressed protein -
7 Sobic.010G199900 extracellular ligand-gated ion channel, putative, expressed -
8 Sobic.001G414000 TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
9 Sobic.005G045200 homeobox domain containing protein, expressed -
10 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
11 Sobic.006G002900 zinc finger, C3HC4 type, domain containing protein, expressed -
12 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
13 Sobic.001G121100 integral membrane protein, putative, expressed -
14 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
15 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.004G174900 - -
17 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
18 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
19 Sobic.003G375900 amino acid transporter, putative, expressed -
20 Sobic.004G131900 - -


Gene co-expression network
sample Sobic004G340800 Sobic004G340800 Sobic002G137800 Sobic002G137800 Sobic004G340800--Sobic002G137800 Sobic003G403500 Sobic003G403500 Sobic004G340800--Sobic003G403500 Sobic001G351100 Sobic001G351100 Sobic004G340800--Sobic001G351100 Sobic005G072200 Sobic005G072200 Sobic004G340800--Sobic005G072200 Sobic004G092000 Sobic004G092000 Sobic004G340800--Sobic004G092000 Sobic002G073900 Sobic002G073900 Sobic004G340800--Sobic002G073900 Sobic010G199900 Sobic010G199900 Sobic004G340800--Sobic010G199900 Sobic001G414000 Sobic001G414000 Sobic004G340800--Sobic001G414000 Sobic005G045200 Sobic005G045200 Sobic004G340800--Sobic005G045200 Sobic001G095750 Sobic001G095750 Sobic002G137800--Sobic001G095750 Sobic001G118900 Sobic001G118900 Sobic002G137800--Sobic001G118900 Sobic002G137800--Sobic004G340800 Sobic002G137800--Sobic001G351100 Sobic006G205200 Sobic006G205200 Sobic002G137800--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic003G138400 Sobic003G138400 Sobic002G137800--Sobic003G138400 Sobic009G028500 Sobic009G028500 Sobic002G137800--Sobic009G028500 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic001G500800 Sobic001G500800 Sobic003G403500--Sobic001G500800 Sobic003G375900 Sobic003G375900 Sobic003G403500--Sobic003G375900 Sobic002G367100 Sobic002G367100 Sobic003G403500--Sobic002G367100 Sobic003G002600 Sobic003G002600 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic002G200700 Sobic002G200700 Sobic003G403500--Sobic002G200700 Sobic003G403500--Sobic004G340800 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic006G042200 Sobic006G042200 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic001G351100--Sobic004G340800 Sobic001G351100--Sobic002G137800 Sobic001G351100--Sobic002G073900 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100 Sobic003G359900 Sobic003G359900 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic009G190800 Sobic009G190800 Sobic005G072200--Sobic009G190800 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic003G339900 Sobic003G339900 Sobic004G092000--Sobic003G339900 Sobic001G339600 Sobic001G339600 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic004G092000--Sobic002G073900 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic003G308700 Sobic003G308700 Sobic002G073900--Sobic003G308700 Sobic002G073900--Sobic005G072200 Sobic002G073900--Sobic006G042200 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic002G073900--Sobic004G092000 Sobic009G008100 Sobic009G008100 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic010G009400 Sobic010G009400 Sobic002G073900--Sobic010G009400 Sobic010G046700 Sobic010G046700 Sobic010G199900--Sobic010G046700 Sobic008G075600 Sobic008G075600 Sobic010G199900--Sobic008G075600 Sobic010G199900--Sobic004G340800 Sobic004G115900 Sobic004G115900 Sobic010G199900--Sobic004G115900 Sobic003G437800 Sobic003G437800 Sobic010G199900--Sobic003G437800 Sobic003G064300 Sobic003G064300 Sobic010G199900--Sobic003G064300 Sobic010G199900--Sobic002G137800 Sobic010G231900 Sobic010G231900 Sobic010G199900--Sobic010G231900 Sobic006G272700 Sobic006G272700 Sobic010G199900--Sobic006G272700 Sobic001G414000--Sobic003G375900 Sobic001G525900 Sobic001G525900 Sobic001G414000--Sobic001G525900 Sobic001G121100 Sobic001G121100 Sobic001G414000--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic001G414000--Sobic003G262900 Sobic002G257100 Sobic002G257100 Sobic001G414000--Sobic002G257100 Sobic004G063200 Sobic004G063200 Sobic001G414000--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G414000--Sobic005G093300 Sobic001G019300 Sobic001G019300 Sobic001G414000--Sobic001G019300 Sobic001G404500 Sobic001G404500 Sobic001G414000--Sobic001G404500 Sobic003G378301 Sobic003G378301 Sobic005G045200--Sobic003G378301 Sobic004G068800 Sobic004G068800 Sobic005G045200--Sobic004G068800 Sobic006G060800 Sobic006G060800 Sobic005G045200--Sobic006G060800 Sobic010G130800 Sobic010G130800 Sobic005G045200--Sobic010G130800 Sobic004G217700 Sobic004G217700 Sobic005G045200--Sobic004G217700 Sobic003G366100 Sobic003G366100 Sobic005G045200--Sobic003G366100 Sobic001G145050 Sobic001G145050 Sobic005G045200--Sobic001G145050 Sobic007G025900 Sobic007G025900 Sobic005G045200--Sobic007G025900 Sobic003G410900 Sobic003G410900 Sobic005G045200--Sobic003G410900
Octagon: transcription factors


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