Gene annotation
Transcriptome id Sobic.003G375900.1
Synonym Sb03g041580, ATAAP8, AAP8
Functional annotation amino acid transporter, putative, expressed
UniProt A0A1W0W0S3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF257
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10010 : amino acid permease 8
RAP-DB (Rice) LOC_Os01g65660.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a039511 , Zm00025a026584
Brachypodium KQK10874
Barley HORVU3Hr1G081610.2 , HORVU3Hr1G081610.1 , HORVU3Hr1G081610.7 , HORVU3Hr1G081610.6 , HORVU3Hr1G081610.5 , HORVU3Hr1G081610.4 , HORVU3Hr1G081610.3
Wheat TraesCS3A02G388100 , TraesCS3D02G381400 , TraesCS3B02G420600
Populus -


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cDNA sequences
Sobic.003G375900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G414000 TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
2 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
3 Sobic.001G525900 homeobox domain containing protein, expressed -
4 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
5 Sobic.002G257100 regulatory protein, putative, expressed -
6 Sobic.001G314900 homeobox domain containing protein, expressed -
7 Sobic.001G121100 integral membrane protein, putative, expressed -
8 Sobic.003G262900 expressed protein -
9 Sobic.010G267700 receptor protein kinase CLAVATA1 precursor, putative, expressed -
10 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
11 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
12 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
13 Sobic.004G201700 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
14 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
15 Sobic.005G097800 eukaryotic aspartyl protease domain containing protein, expressed -
16 Sobic.006G065900 expressed protein -
17 Sobic.002G395200 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.003G339900 expressed protein -
19 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.004G254000 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G375900 Sobic003G375900 Sobic001G414000 Sobic001G414000 Sobic003G375900--Sobic001G414000 Sobic003G403500 Sobic003G403500 Sobic003G375900--Sobic003G403500 Sobic001G525900 Sobic001G525900 Sobic003G375900--Sobic001G525900 Sobic006G164300 Sobic006G164300 Sobic003G375900--Sobic006G164300 Sobic002G257100 Sobic002G257100 Sobic003G375900--Sobic002G257100 Sobic001G314900 Sobic001G314900 Sobic003G375900--Sobic001G314900 Sobic001G121100 Sobic001G121100 Sobic003G375900--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic003G375900--Sobic003G262900 Sobic010G267700 Sobic010G267700 Sobic003G375900--Sobic010G267700 Sobic001G414000--Sobic003G375900 Sobic001G414000--Sobic001G525900 Sobic001G414000--Sobic001G121100 Sobic001G414000--Sobic003G262900 Sobic001G414000--Sobic002G257100 Sobic004G063200 Sobic004G063200 Sobic001G414000--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G414000--Sobic005G093300 Sobic001G019300 Sobic001G019300 Sobic001G414000--Sobic001G019300 Sobic001G404500 Sobic001G404500 Sobic001G414000--Sobic001G404500 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic001G500800 Sobic001G500800 Sobic003G403500--Sobic001G500800 Sobic003G403500--Sobic003G375900 Sobic002G367100 Sobic002G367100 Sobic003G403500--Sobic002G367100 Sobic003G002600 Sobic003G002600 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic002G200700 Sobic002G200700 Sobic003G403500--Sobic002G200700 Sobic004G340800 Sobic004G340800 Sobic003G403500--Sobic004G340800 Sobic002G281000 Sobic002G281000 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G525900--Sobic001G019300 Sobic005G021600 Sobic005G021600 Sobic001G525900--Sobic005G021600 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic008G063100 Sobic008G063100 Sobic001G525900--Sobic008G063100 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic006G164300--Sobic001G525900 Sobic006G164300--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic006G164300--Sobic005G203300 Sobic002G046900 Sobic002G046900 Sobic006G164300--Sobic002G046900 Sobic004G099700 Sobic004G099700 Sobic006G164300--Sobic004G099700 Sobic006G164300--Sobic002G281000 Sobic009G202400 Sobic009G202400 Sobic006G164300--Sobic009G202400 Sobic003G410900 Sobic003G410900 Sobic006G164300--Sobic003G410900 Sobic005G175600 Sobic005G175600 Sobic006G164300--Sobic005G175600 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic004G258400 Sobic004G258400 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic001G314900--Sobic001G404500 Sobic004G224500 Sobic004G224500 Sobic001G314900--Sobic004G224500 Sobic006G258700 Sobic006G258700 Sobic001G314900--Sobic006G258700 Sobic001G314900--Sobic001G525900 Sobic010G269400 Sobic010G269400 Sobic001G314900--Sobic010G269400 Sobic006G131800 Sobic006G131800 Sobic001G314900--Sobic006G131800 Sobic010G193000 Sobic010G193000 Sobic001G314900--Sobic010G193000 Sobic001G314900--Sobic002G257100 Sobic001G314900--Sobic004G201700 Sobic002G366100 Sobic002G366100 Sobic001G121100--Sobic002G366100 Sobic001G121100--Sobic001G525900 Sobic001G121100--Sobic001G321600 Sobic001G121100--Sobic005G175600 Sobic001G121100--Sobic001G414000 Sobic001G030500 Sobic001G030500 Sobic001G121100--Sobic001G030500 Sobic004G068700 Sobic004G068700 Sobic001G121100--Sobic004G068700 Sobic002G287000 Sobic002G287000 Sobic001G121100--Sobic002G287000 Sobic010G186400 Sobic010G186400 Sobic001G121100--Sobic010G186400 Sobic003G262900--Sobic001G414000 Sobic003G262900--Sobic003G375900 Sobic005G097800 Sobic005G097800 Sobic003G262900--Sobic005G097800 Sobic003G262900--Sobic002G281000 Sobic003G262900--Sobic001G404500 Sobic002G371900 Sobic002G371900 Sobic003G262900--Sobic002G371900 Sobic003G262900--Sobic002G265400 Sobic003G262900--Sobic001G525900 Sobic003G262900--Sobic001G019300 Sobic008G186400 Sobic008G186400 Sobic010G267700--Sobic008G186400 Sobic010G267700--Sobic002G367100 Sobic010G267700--Sobic003G375900 Sobic010G267700--Sobic003G403500 Sobic006G002900 Sobic006G002900 Sobic010G267700--Sobic006G002900 Sobic003G397200 Sobic003G397200 Sobic010G267700--Sobic003G397200 Sobic003G263001 Sobic003G263001 Sobic010G267700--Sobic003G263001 Sobic005G012200 Sobic005G012200 Sobic010G267700--Sobic005G012200 Sobic003G422700 Sobic003G422700 Sobic010G267700--Sobic003G422700
Octagon: transcription factors


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