Gene annotation
Transcriptome id Sobic.001G121100.1
Synonym Sb01g010670
Functional annotation integral membrane protein, putative, expressed
UniProt A0A1B6QIK5
Pfam PF00892
Panther DB PTHR12715 PTHR12715:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g49940.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a007783
Brachypodium KQK13577
Barley HORVU4Hr1G007000.4 , HORVU4Hr1G007000.3 , HORVU4Hr1G007000.2 , HORVU4Hr1G007000.1
Wheat TraesCS4D02G040300
Populus -


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cDNA sequences
Sobic.001G121100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
2 Sobic.001G525900 homeobox domain containing protein, expressed -
3 Sobic.001G321600 dehydration response related protein, putative, expressed -
4 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.001G414000 TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
7 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
8 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
9 Sobic.010G186400 Tetratricopeptide repeat (TPR)-like superfamily protein(PubMedID : 26465154)@expressed protein -
10 Sobic.003G422800 amino acid permease family protein, putative, expressed -
11 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
12 Sobic.002G163700 expressed protein -
13 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
14 Sobic.005G045200 homeobox domain containing protein, expressed -
15 Sobic.001G145050 - -
16 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
17 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
18 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
19 Sobic.008G142600 amino acid permease family protein, putative, expressed -
20 Sobic.003G375900 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic001G121100 Sobic001G121100 Sobic002G366100 Sobic002G366100 Sobic001G121100--Sobic002G366100 Sobic001G525900 Sobic001G525900 Sobic001G121100--Sobic001G525900 Sobic001G321600 Sobic001G321600 Sobic001G121100--Sobic001G321600 Sobic005G175600 Sobic005G175600 Sobic001G121100--Sobic005G175600 Sobic001G414000 Sobic001G414000 Sobic001G121100--Sobic001G414000 Sobic001G030500 Sobic001G030500 Sobic001G121100--Sobic001G030500 Sobic004G068700 Sobic004G068700 Sobic001G121100--Sobic004G068700 Sobic002G287000 Sobic002G287000 Sobic001G121100--Sobic002G287000 Sobic010G186400 Sobic010G186400 Sobic001G121100--Sobic010G186400 Sobic002G195700 Sobic002G195700 Sobic002G366100--Sobic002G195700 Sobic001G145050 Sobic001G145050 Sobic002G366100--Sobic001G145050 Sobic001G005500 Sobic001G005500 Sobic002G366100--Sobic001G005500 Sobic009G255100 Sobic009G255100 Sobic002G366100--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic002G366100--Sobic006G060800 Sobic002G366100--Sobic001G321600 Sobic005G021600 Sobic005G021600 Sobic002G366100--Sobic005G021600 Sobic002G366100--Sobic004G068700 Sobic001G404500 Sobic001G404500 Sobic002G366100--Sobic001G404500 Sobic002G281000 Sobic002G281000 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G019300 Sobic001G019300 Sobic001G525900--Sobic001G019300 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic008G063100 Sobic008G063100 Sobic001G525900--Sobic008G063100 Sobic004G063200 Sobic004G063200 Sobic001G525900--Sobic004G063200 Sobic001G525900--Sobic001G321600 Sobic001G321600--Sobic001G005500 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic010G089200 Sobic010G089200 Sobic001G321600--Sobic010G089200 Sobic008G073400 Sobic008G073400 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic001G321600--Sobic002G366100 Sobic002G046900 Sobic002G046900 Sobic005G175600--Sobic002G046900 Sobic005G175600--Sobic008G063100 Sobic005G175600--Sobic001G404500 Sobic005G175500 Sobic005G175500 Sobic005G175600--Sobic005G175500 Sobic005G175600--Sobic002G366100 Sobic005G175600--Sobic001G048000 Sobic005G175600--Sobic005G021600 Sobic005G175600--Sobic001G525900 Sobic005G175600--Sobic002G281000 Sobic003G375900 Sobic003G375900 Sobic001G414000--Sobic003G375900 Sobic001G414000--Sobic001G525900 Sobic001G414000--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic001G414000--Sobic003G262900 Sobic002G257100 Sobic002G257100 Sobic001G414000--Sobic002G257100 Sobic001G414000--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G414000--Sobic005G093300 Sobic001G414000--Sobic001G019300 Sobic001G414000--Sobic001G404500 Sobic003G255100 Sobic003G255100 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic010G079700 Sobic010G079700 Sobic001G030500--Sobic010G079700 Sobic001G179100 Sobic001G179100 Sobic001G030500--Sobic001G179100 Sobic007G191900 Sobic007G191900 Sobic001G030500--Sobic007G191900 Sobic001G030500--Sobic001G005500 Sobic006G269400 Sobic006G269400 Sobic001G030500--Sobic006G269400 Sobic001G030500--Sobic001G121100 Sobic002G271600 Sobic002G271600 Sobic001G030500--Sobic002G271600 Sobic004G068700--Sobic001G179100 Sobic003G214000 Sobic003G214000 Sobic004G068700--Sobic003G214000 Sobic004G068700--Sobic002G287000 Sobic001G161300 Sobic001G161300 Sobic004G068700--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic004G068700--Sobic008G111300 Sobic002G384400 Sobic002G384400 Sobic004G068700--Sobic002G384400 Sobic004G068700--Sobic002G366100 Sobic002G226100 Sobic002G226100 Sobic004G068700--Sobic002G226100 Sobic002G386400 Sobic002G386400 Sobic004G068700--Sobic002G386400 Sobic002G287000--Sobic004G068700 Sobic002G287000--Sobic001G179100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic002G287000--Sobic001G321600 Sobic002G287000--Sobic003G214000 Sobic002G287000--Sobic001G005500 Sobic009G238100 Sobic009G238100 Sobic002G287000--Sobic009G238100 Sobic002G287000--Sobic002G195700 Sobic003G421400 Sobic003G421400 Sobic010G186400--Sobic003G421400 Sobic010G186400--Sobic002G386400 Sobic003G360800 Sobic003G360800 Sobic010G186400--Sobic003G360800 Sobic006G110900 Sobic006G110900 Sobic010G186400--Sobic006G110900 Sobic008G063200 Sobic008G063200 Sobic010G186400--Sobic008G063200 Sobic009G141400 Sobic009G141400 Sobic010G186400--Sobic009G141400 Sobic010G186400--Sobic001G121100 Sobic010G186400--Sobic001G161300 Sobic003G253300 Sobic003G253300 Sobic010G186400--Sobic003G253300
Octagon: transcription factors


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