Gene annotation
Transcriptome id Sobic.001G414000.1
Synonym Sb01g039000, HERK1
Functional annotation TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt C5WP98
Pfam PF11721 PF07714
Panther DB PTHR27003 PTHR27003:SF65
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G46290 : hercules receptor kinase 1
RAP-DB (Rice) LOC_Os03g17300.4 : TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a000327 , Zm00025a009653 , Zm00025a043246 , Zm00025a001899 , Zm00025a023937 , Zm00025a035347 , Zm00025a049715 , Zm00025a044999
Brachypodium KQK23907 , KQK22263
Barley HORVU3Hr1G034670.11 , HORVU3Hr1G034670.10 , HORVU3Hr1G034670.12 , HORVU5Hr1G084100.2 , HORVU5Hr1G084100.3 , HORVU5Hr1G084100.1 , HORVU5Hr1G084100.6 , HORVU5Hr1G084100.4 , HORVU5Hr1G084100.5 , HORVU4Hr1G058220.2 , HORVU4Hr1G058220.1 , HORVU2Hr1G013080.1 , HORVU3Hr1G034670.3 , HORVU3Hr1G034670.8 , HORVU4Hr1G084510.1 , HORVU4Hr1G084510.2 , HORVU4Hr1G084510.3 , HORVU4Hr1G084510.4 , HORVU0Hr1G035650.1
Wheat TraesCS3B02G202500 , TraesCS2B02G094400 , TraesCS4B02G367000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G375900 amino acid transporter, putative, expressed -
2 Sobic.001G525900 homeobox domain containing protein, expressed -
3 Sobic.001G121100 integral membrane protein, putative, expressed -
4 Sobic.003G262900 expressed protein -
5 Sobic.002G257100 regulatory protein, putative, expressed -
6 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.005G093300 - -
8 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
9 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
10 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
11 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
12 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.001G198700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.001G145050 - -
15 Sobic.009G202400 expressed protein -
16 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
17 Sobic.003G376200 expressed protein -
18 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
19 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
20 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G414000 Sobic001G414000 Sobic003G375900 Sobic003G375900 Sobic001G414000--Sobic003G375900 Sobic001G525900 Sobic001G525900 Sobic001G414000--Sobic001G525900 Sobic001G121100 Sobic001G121100 Sobic001G414000--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic001G414000--Sobic003G262900 Sobic002G257100 Sobic002G257100 Sobic001G414000--Sobic002G257100 Sobic004G063200 Sobic004G063200 Sobic001G414000--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G414000--Sobic005G093300 Sobic001G019300 Sobic001G019300 Sobic001G414000--Sobic001G019300 Sobic001G404500 Sobic001G404500 Sobic001G414000--Sobic001G404500 Sobic003G375900--Sobic001G414000 Sobic003G403500 Sobic003G403500 Sobic003G375900--Sobic003G403500 Sobic003G375900--Sobic001G525900 Sobic006G164300 Sobic006G164300 Sobic003G375900--Sobic006G164300 Sobic003G375900--Sobic002G257100 Sobic001G314900 Sobic001G314900 Sobic003G375900--Sobic001G314900 Sobic003G375900--Sobic001G121100 Sobic003G375900--Sobic003G262900 Sobic010G267700 Sobic010G267700 Sobic003G375900--Sobic010G267700 Sobic002G281000 Sobic002G281000 Sobic001G525900--Sobic002G281000 Sobic001G525900--Sobic001G404500 Sobic001G525900--Sobic001G019300 Sobic005G021600 Sobic005G021600 Sobic001G525900--Sobic005G021600 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic008G063100 Sobic008G063100 Sobic001G525900--Sobic008G063100 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic002G366100 Sobic002G366100 Sobic001G121100--Sobic002G366100 Sobic001G121100--Sobic001G525900 Sobic001G121100--Sobic001G321600 Sobic005G175600 Sobic005G175600 Sobic001G121100--Sobic005G175600 Sobic001G121100--Sobic001G414000 Sobic001G030500 Sobic001G030500 Sobic001G121100--Sobic001G030500 Sobic004G068700 Sobic004G068700 Sobic001G121100--Sobic004G068700 Sobic002G287000 Sobic002G287000 Sobic001G121100--Sobic002G287000 Sobic010G186400 Sobic010G186400 Sobic001G121100--Sobic010G186400 Sobic003G262900--Sobic001G414000 Sobic003G262900--Sobic003G375900 Sobic005G097800 Sobic005G097800 Sobic003G262900--Sobic005G097800 Sobic003G262900--Sobic002G281000 Sobic003G262900--Sobic001G404500 Sobic002G371900 Sobic002G371900 Sobic003G262900--Sobic002G371900 Sobic002G265400 Sobic002G265400 Sobic003G262900--Sobic002G265400 Sobic003G262900--Sobic001G525900 Sobic003G262900--Sobic001G019300 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic004G258400 Sobic004G258400 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic002G257100--Sobic005G093300 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic009G189000 Sobic009G189000 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic004G063200--Sobic001G019300 Sobic006G123500 Sobic006G123500 Sobic004G063200--Sobic006G123500 Sobic005G093300--Sobic001G198700 Sobic009G202400 Sobic009G202400 Sobic005G093300--Sobic009G202400 Sobic007G037800 Sobic007G037800 Sobic005G093300--Sobic007G037800 Sobic005G093300--Sobic002G257100 Sobic005G093300--Sobic002G265400 Sobic001G201800 Sobic001G201800 Sobic005G093300--Sobic001G201800 Sobic009G252100 Sobic009G252100 Sobic005G093300--Sobic009G252100 Sobic005G093300--Sobic001G019300 Sobic005G093300--Sobic002G366100 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic001G019300--Sobic008G073400 Sobic002G195700 Sobic002G195700 Sobic001G019300--Sobic002G195700 Sobic005G190900 Sobic005G190900 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700
Octagon: transcription factors


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