Gene annotation
Transcriptome id Sobic.001G198700.1
Synonym Sb01g017510
Functional annotation invertase/pectin methylesterase inhibitor family protein, putative, expressed
UniProt C5WWB0
Pfam PF04043
Panther DB PTHR31080 PTHR31080:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G62360 : Plant invertase/pectin methylesterase inhibitor superfamily protein
RAP-DB (Rice) LOC_Os10g36500.1 : invertase/pectin methylesterase inhibitor family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G047710.2 , HORVU1Hr1G047710.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G106500 expressed protein -
2 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
3 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
4 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
5 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
6 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.005G093300 - -
8 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -
9 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
10 Sobic.009G202400 expressed protein -
11 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
12 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
13 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
14 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.009G153200 U-box domain containing protein, expressed -
16 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.009G252100 expressed protein -
18 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
19 Sobic.004G197800 expressed protein -
20 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -


Gene co-expression network
sample Sobic001G198700 Sobic001G198700 Sobic003G106500 Sobic003G106500 Sobic001G198700--Sobic003G106500 Sobic001G019300 Sobic001G019300 Sobic001G198700--Sobic001G019300 Sobic002G265400 Sobic002G265400 Sobic001G198700--Sobic002G265400 Sobic002G195700 Sobic002G195700 Sobic001G198700--Sobic002G195700 Sobic008G063100 Sobic008G063100 Sobic001G198700--Sobic008G063100 Sobic004G063200 Sobic004G063200 Sobic001G198700--Sobic004G063200 Sobic005G093300 Sobic005G093300 Sobic001G198700--Sobic005G093300 Sobic002G371900 Sobic002G371900 Sobic001G198700--Sobic002G371900 Sobic004G078600 Sobic004G078600 Sobic001G198700--Sobic004G078600 Sobic003G106500--Sobic001G198700 Sobic008G073400 Sobic008G073400 Sobic003G106500--Sobic008G073400 Sobic002G001800 Sobic002G001800 Sobic003G106500--Sobic002G001800 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic003G106500--Sobic005G190900 Sobic002G281000 Sobic002G281000 Sobic003G106500--Sobic002G281000 Sobic005G192600 Sobic005G192600 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700 Sobic001G019300--Sobic002G265400 Sobic001G019300--Sobic002G281000 Sobic005G063900 Sobic005G063900 Sobic001G019300--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic001G019300--Sobic008G073400 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G019300--Sobic001G198700 Sobic002G265400--Sobic001G019300 Sobic002G265400--Sobic004G063200 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic002G265400--Sobic001G198700 Sobic002G265400--Sobic005G190900 Sobic009G202400 Sobic009G202400 Sobic002G265400--Sobic009G202400 Sobic002G265400--Sobic002G371900 Sobic009G252100 Sobic009G252100 Sobic002G265400--Sobic009G252100 Sobic002G195700--Sobic001G005500 Sobic002G195700--Sobic008G073400 Sobic002G195700--Sobic001G321600 Sobic002G195700--Sobic001G019300 Sobic002G366100 Sobic002G366100 Sobic002G195700--Sobic002G366100 Sobic002G195700--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic002G195700--Sobic005G021600 Sobic006G269400 Sobic006G269400 Sobic002G195700--Sobic006G269400 Sobic002G195700--Sobic001G198700 Sobic004G343100 Sobic004G343100 Sobic008G063100--Sobic004G343100 Sobic008G063100--Sobic005G021600 Sobic008G063100--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic008G063100--Sobic001G404500 Sobic008G063100--Sobic001G198700 Sobic008G063100--Sobic004G063200 Sobic008G063100--Sobic002G195700 Sobic008G063100--Sobic009G202400 Sobic005G175600 Sobic005G175600 Sobic008G063100--Sobic005G175600 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic004G063200--Sobic002G281000 Sobic006G060800 Sobic006G060800 Sobic004G063200--Sobic006G060800 Sobic009G189000 Sobic009G189000 Sobic004G063200--Sobic009G189000 Sobic004G063200--Sobic001G198700 Sobic004G063200--Sobic008G063100 Sobic004G063200--Sobic001G019300 Sobic006G123500 Sobic006G123500 Sobic004G063200--Sobic006G123500 Sobic005G093300--Sobic001G198700 Sobic005G093300--Sobic009G202400 Sobic007G037800 Sobic007G037800 Sobic005G093300--Sobic007G037800 Sobic002G257100 Sobic002G257100 Sobic005G093300--Sobic002G257100 Sobic005G093300--Sobic002G265400 Sobic001G201800 Sobic001G201800 Sobic005G093300--Sobic001G201800 Sobic005G093300--Sobic009G252100 Sobic005G093300--Sobic001G019300 Sobic005G093300--Sobic002G366100 Sobic002G371900--Sobic002G001800 Sobic002G371900--Sobic003G106500 Sobic002G371900--Sobic001G198700 Sobic002G371900--Sobic002G281000 Sobic002G371900--Sobic002G265400 Sobic002G371900--Sobic004G063200 Sobic002G371900--Sobic001G019300 Sobic002G371900--Sobic005G190900 Sobic003G135800 Sobic003G135800 Sobic002G371900--Sobic003G135800 Sobic004G078600--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic004G078600--Sobic002G423600 Sobic009G115400 Sobic009G115400 Sobic004G078600--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic004G078600--Sobic002G041800 Sobic009G075100 Sobic009G075100 Sobic004G078600--Sobic009G075100 Sobic005G182701 Sobic005G182701 Sobic004G078600--Sobic005G182701 Sobic001G012000 Sobic001G012000 Sobic004G078600--Sobic001G012000 Sobic004G078600--Sobic009G252100 Sobic007G055600 Sobic007G055600 Sobic004G078600--Sobic007G055600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.