Gene annotation
Transcriptome id Sobic.003G422800.2,Sobic.003G422800.1
Synonym BAT1, Sb03g045580
Functional annotation amino acid permease family protein, putative, expressed
UniProt A0A1W0W1D3 , A0A1W0W1G0
Pfam PF13520 PF00324
Panther DB PTHR11785 PTHR11785:SF364
NCBI CDD KOG1289; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport GO:0016020membrane GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G01170 : bidirectional amino acid transporter 1
RAP-DB (Rice) LOC_Os01g71740.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026049 , Zm00025a026047 , Zm00025a028664
Brachypodium KQK11517 , KQK11518 , KQK03895 , PNT73590
Barley HORVU3Hr1G105870.15 , HORVU3Hr1G105870.7 , HORVU3Hr1G105870.8 , HORVU3Hr1G105870.9 , HORVU3Hr1G105870.4 , HORVU3Hr1G105870.5 , HORVU3Hr1G105870.6 , HORVU3Hr1G105870.1 , HORVU3Hr1G105870.2 , HORVU3Hr1G105870.3 , HORVU3Hr1G105870.14 , HORVU3Hr1G105870.12 , HORVU3Hr1G105870.13 , HORVU3Hr1G105870.10 , HORVU3Hr1G105870.11 , HORVU3Hr1G105920.6 , HORVU3Hr1G105920.7 , HORVU3Hr1G105920.4 , HORVU3Hr1G105920.3 , HORVU3Hr1G105920.1 , HORVU3Hr1G105920.8 , HORVU3Hr1G105920.9 , HORVU3Hr1G105920.11
Wheat TraesCS3D02G480000 , TraesCS3B02G532100 , TraesCS3A02G484600 , TraesCS3B02G531900 , TraesCS3A02G484700 , TraesCS3A02G484900 , TraesCS3B02G531700 , TraesCS3B02G532305 , TraesCS3D02G479800 , TraesCS3D02G480100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G060601 - -
2 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
3 Sobic.003G068600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.002G163700 expressed protein -
5 Sobic.001G121100 integral membrane protein, putative, expressed -
6 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
7 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
8 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
9 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.002G362100 expressed protein -
11 Sobic.007G089300 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
14 Sobic.009G023401 - -
15 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
16 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.005G045200 homeobox domain containing protein, expressed -
18 Sobic.004G164200 heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
19 Sobic.010G077400 nitrilase, putative, expressed K13566: NIT2, omega-amidase
20 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial


Gene co-expression network
sample Sobic003G422800 Sobic003G422800 Sobic006G060601 Sobic006G060601 Sobic003G422800--Sobic006G060601 Sobic006G220600 Sobic006G220600 Sobic003G422800--Sobic006G220600 Sobic003G068600 Sobic003G068600 Sobic003G422800--Sobic003G068600 Sobic002G163700 Sobic002G163700 Sobic003G422800--Sobic002G163700 Sobic001G121100 Sobic001G121100 Sobic003G422800--Sobic001G121100 Sobic010G207500 Sobic010G207500 Sobic003G422800--Sobic010G207500 Sobic004G210900 Sobic004G210900 Sobic003G422800--Sobic004G210900 Sobic002G287000 Sobic002G287000 Sobic003G422800--Sobic002G287000 Sobic005G175500 Sobic005G175500 Sobic003G422800--Sobic005G175500 Sobic009G213800 Sobic009G213800 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic001G275500 Sobic001G275500 Sobic006G060601--Sobic001G275500 Sobic006G060601--Sobic005G175500 Sobic006G060601--Sobic003G422800 Sobic006G060601--Sobic010G207500 Sobic003G359500 Sobic003G359500 Sobic006G060601--Sobic003G359500 Sobic009G019100 Sobic009G019100 Sobic006G060601--Sobic009G019100 Sobic002G025700 Sobic002G025700 Sobic006G060601--Sobic002G025700 Sobic007G205600 Sobic007G205600 Sobic006G220600--Sobic007G205600 Sobic006G220600--Sobic003G422800 Sobic006G220600--Sobic002G163700 Sobic007G110200 Sobic007G110200 Sobic006G220600--Sobic007G110200 Sobic006G220600--Sobic004G210900 Sobic001G450600 Sobic001G450600 Sobic006G220600--Sobic001G450600 Sobic010G189200 Sobic010G189200 Sobic006G220600--Sobic010G189200 Sobic005G138600 Sobic005G138600 Sobic006G220600--Sobic005G138600 Sobic003G222300 Sobic003G222300 Sobic006G220600--Sobic003G222300 Sobic003G068600--Sobic007G205600 Sobic007G227600 Sobic007G227600 Sobic003G068600--Sobic007G227600 Sobic003G068600--Sobic003G422800 Sobic010G211500 Sobic010G211500 Sobic003G068600--Sobic010G211500 Sobic003G068600--Sobic002G163700 Sobic009G238100 Sobic009G238100 Sobic003G068600--Sobic009G238100 Sobic002G038300 Sobic002G038300 Sobic003G068600--Sobic002G038300 Sobic010G231100 Sobic010G231100 Sobic003G068600--Sobic010G231100 Sobic003G174100 Sobic003G174100 Sobic003G068600--Sobic003G174100 Sobic003G439600 Sobic003G439600 Sobic002G163700--Sobic003G439600 Sobic002G163700--Sobic001G450600 Sobic002G163700--Sobic007G227600 Sobic006G214700 Sobic006G214700 Sobic002G163700--Sobic006G214700 Sobic002G250100 Sobic002G250100 Sobic002G163700--Sobic002G250100 Sobic006G197700 Sobic006G197700 Sobic002G163700--Sobic006G197700 Sobic002G386400 Sobic002G386400 Sobic002G163700--Sobic002G386400 Sobic002G163700--Sobic002G038300 Sobic003G245800 Sobic003G245800 Sobic002G163700--Sobic003G245800 Sobic002G366100 Sobic002G366100 Sobic001G121100--Sobic002G366100 Sobic001G525900 Sobic001G525900 Sobic001G121100--Sobic001G525900 Sobic001G321600 Sobic001G321600 Sobic001G121100--Sobic001G321600 Sobic005G175600 Sobic005G175600 Sobic001G121100--Sobic005G175600 Sobic001G414000 Sobic001G414000 Sobic001G121100--Sobic001G414000 Sobic001G030500 Sobic001G030500 Sobic001G121100--Sobic001G030500 Sobic004G068700 Sobic004G068700 Sobic001G121100--Sobic004G068700 Sobic001G121100--Sobic002G287000 Sobic010G186400 Sobic010G186400 Sobic001G121100--Sobic010G186400 Sobic010G207500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G207500--Sobic006G201100 Sobic004G300000 Sobic004G300000 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic002G046900 Sobic002G046900 Sobic010G207500--Sobic002G046900 Sobic010G035500 Sobic010G035500 Sobic010G207500--Sobic010G035500 Sobic004G164200 Sobic004G164200 Sobic010G207500--Sobic004G164200 Sobic009G141400 Sobic009G141400 Sobic010G207500--Sobic009G141400 Sobic001G351400 Sobic001G351400 Sobic010G207500--Sobic001G351400 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic004G210900--Sobic005G175500 Sobic010G000600 Sobic010G000600 Sobic004G210900--Sobic010G000600 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic008G146900 Sobic008G146900 Sobic004G210900--Sobic008G146900 Sobic004G210900--Sobic009G213800 Sobic004G181700 Sobic004G181700 Sobic004G210900--Sobic004G181700 Sobic003G014300 Sobic003G014300 Sobic004G210900--Sobic003G014300 Sobic002G287000--Sobic004G068700 Sobic001G179100 Sobic001G179100 Sobic002G287000--Sobic001G179100 Sobic003G255100 Sobic003G255100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic002G287000--Sobic001G321600 Sobic003G214000 Sobic003G214000 Sobic002G287000--Sobic003G214000 Sobic001G005500 Sobic001G005500 Sobic002G287000--Sobic001G005500 Sobic002G287000--Sobic009G238100 Sobic002G195700 Sobic002G195700 Sobic002G287000--Sobic002G195700 Sobic005G175500--Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic005G175500--Sobic006G258700 Sobic005G175500--Sobic005G175600 Sobic005G175500--Sobic004G300000 Sobic005G175500--Sobic006G060601 Sobic001G224900 Sobic001G224900 Sobic005G175500--Sobic001G224900 Sobic001G404500 Sobic001G404500 Sobic005G175500--Sobic001G404500 Sobic005G175500--Sobic009G019100 Sobic005G175500--Sobic010G207500
Octagon: transcription factors


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